PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021674876.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 240aa MW: 27914.8 Da PI: 9.6761 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.9 | 8.8e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+ XP_021674876.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 101.3 | 1.3e-33 | 78 | 175 | 3 | 100 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++ +++ ++++ s++ e+akLk+++e qr+qRh++GedL++LslkeLq++eqq++++lk+iRs+Kn+l++e+i elqkk k+lqe+n++ kk XP_021674876.1 78 DRQLVATGSETNGSWTLEHAKLKARMEVFQRNQRHFMGEDLDTLSLKELQSVEQQIDSALKHIRSRKNQLMYESIAELQKKSKALQEQNNQFAKK 172 5666677788899********************************************************************************** PP K-box 98 lee 100 ++e XP_021674876.1 173 VKE 175 986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD 60 SCSMERILER YERYSYADRQ LVATGSETNG SWTLEHAKLK ARMEVFQRNQ RHFMGEDLDT 120 LSLKELQSVE QQIDSALKHI RSRKNQLMYE SIAELQKKSK ALQEQNNQFA KKVKEKEKEK 180 EIAQQNQKEQ QNHIIDSSTV LPPPMQSLNI RGNRDEDETT PMQNLANAVL PSWMIPYLNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 3e-94 | MIKC_MADS family protein |