PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021674875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27571.4 Da PI: 8.7464 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.3 | 3.1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_021674875.1 9 KRIENKINRQVTFGKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 91.2 | 1.9e-30 | 86 | 173 | 13 | 100 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++s +qe+ kLk+++e Lqr+qR+llGedL++L+ keL+qLe qLe+slk+iR + ++++l+q+ +lq+ke+ l e+nkaL++klee XP_021674875.1 86 ETQSNYQEYLKLKARVEVLQRSQRNLLGEDLGPLNTKELEQLELQLETSLKQIRLTMTQFMLDQLADLQNKERLLIETNKALKRKLEE 173 7899*********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGRVELKR IENKINRQVT FGKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST 60 SNMMRTLERY QKCSYGGLEA SQPGYETQSN YQEYLKLKAR VEVLQRSQRN LLGEDLGPLN 120 TKELEQLELQ LETSLKQIRL TMTQFMLDQL ADLQNKERLL IETNKALKRK LEEGSGQVPL 180 RLAWEGGGHT IPYSRLPAHS DGFFQPKGGN STLQIGYNPE GAEEDNVSHT HDLNGFIPGF 240 ML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 2e-98 | MIKC_MADS family protein |