PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674564.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 305aa MW: 33290.8 Da PI: 6.7441

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.0007	119	141	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_021674564.1 119 YECKTCNRTFPSFQALGGHRASH 141 99**********99999998887 PP
2	zf-C2H2	13.2	0.00026	210	232	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H XP_021674564.1 210 HECSICGSEFTSGQALGGHMRRH 232 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MDYMEAQEEF MGSNDLSQIV KGKRTKRLRS SSAITSSSSS GFGGSGGGGE TGFVVEEHGS 60 ISSPASCSEI YESTEEEEDM ANCLILLAQG DGPRRKEQVS ARKLSDASAT TNKADFYVYE 120 CKTCNRTFPS FQALGGHRAS HKKPKSIVEE KKGLLALPLL DDLEDCQLNK SSSTTSSSDH 180 LHHLQPQPPR SLQISNKGFN FLGNNKAKIH ECSICGSEFT SGQALGGHMR RHRANTGSNN 240 QVAITTTDSN HINSDDQIKP RNILSLDLNL PAPEEDHHHR ESKFQFASTK QALVFSSPAL 300 VDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	3e-56	C2H2 family protein