PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674464.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 384aa MW: 42733.2 Da PI: 8.7308

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.4	3.2e-07	228	250	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H XP_021674464.1 228 HYCQVCGKGFKRDANLRMHMRAH 250 68*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MISEAASCFP NVSQGCLQMY PGSEDDVATT LEASSISETH SNSLLYSLSL LKDKVHQVQS 60 LVSLLISPNH QTQPESTSLA MAKMGTMIQE IIVTASSMFF TCQQMAIGSN SAAANNNNTE 120 ELHQAAQANK VQENGLLQPN FGGNNIGADR GQSFFSSETF EPWYGENYNN NKNSNRGMLV 180 LGNGSNQKVE RKGFSRVRSE NTAEGKSLVK NYDIIEVDAA DLLAKYTHYC QVCGKGFKRD 240 ANLRMHMRAH GDEYKTSAAL SNPMKNSNSS GILGDNNESW TKLPRKYSCP QEGCRWNQKH 300 AKFQPLKSMI CVKNHYKRSH CPKMYVCKRC NRKQFSVLSD LRTHEKHCGD LKWQCSCGTT 360 FSRKDKLMGH VALFVGHTPA INNN

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MISEAASCFP NVSQGCLQMY PGSEDDVATT LEASSISETH SNSLLYSLSL LKDKVHQVQS  60
LVSLLISPNH QTQPESTSLA MAKMGTMIQE IIVTASSMFF TCQQMAIGSN SAAANNNNTE  120
ELHQAAQANK VQENGLLQPN FGGNNIGADR GQSFFSSETF EPWYGENYNN NKNSNRGMLV  180
LGNGSNQKVE RKGFSRVRSE NTAEGKSLVK NYDIIEVDAA DLLAKYTHYC QVCGKGFKRD  240
ANLRMHMRAH GDEYKTSAAL SNPMKNSNSS GILGDNNESW TKLPRKYSCP QEGCRWNQKH  300
AKFQPLKSMI CVKNHYKRSH CPKMYVCKRC NRKQFSVLSD LRTHEKHCGD LKWQCSCGTT  360
FSRKDKLMGH VALFVGHTPA INNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-108	C2H2 family protein