PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674463.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 370aa MW: 41152.4 Da PI: 6.7057

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v ++G+g+W++ +++ g++R++k+c++rw +yl XP_021674463.1 14 RGLWTAEEDAKILAYVSKHGTGNWTALPKKAGLRRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	47.9	3.1e-15	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++T++E+el+v++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_021674463.1 68 DNFTPQEEELIVRLHAAIGSR-WSIIAQQLP-GRTDNDVKNYWNT 110 68*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGRPPCCDKL NVKRGLWTAE EDAKILAYVS KHGTGNWTAL PKKAGLRRCG KSCRLRWTNY 60 LRPDLKHDNF TPQEEELIVR LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG 120 IDPVTHKPFS QILADYGNIG CLPKYGTRIG SLTRDIKNAF ISKPAERCPY QPEGIIATIS 180 NHLVPPKVEP IQECFLNSKN TISNSNHSLD LLDQLQAIKL VTEASSCSNY EIISDQFLKE 240 GSLSSSSSSS SSICSTANRE KSTPSFSWRD FLLEDAFMPS DHSQEKENAT ELSSNYLTSQ 300 AQKVIVQGQI GSEVTMRGDV GAEGIELAIP STSFQLPPSS HTSSFVEAML DQGSENFLDF 360 PNLVEEPFSY

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGRPPCCDKL NVKRGLWTAE EDAKILAYVS KHGTGNWTAL PKKAGLRRCG KSCRLRWTNY  60
LRPDLKHDNF TPQEEELIVR LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG  120
IDPVTHKPFS QILADYGNIG CLPKYGTRIG SLTRDIKNAF ISKPAERCPY QPEGIIATIS  180
NHLVPPKVEP IQECFLNSKN TISNSNHSLD LLDQLQAIKL VTEASSCSNY EIISDQFLKE  240
GSLSSSSSSS SSICSTANRE KSTPSFSWRD FLLEDAFMPS DHSQEKENAT ELSSNYLTSQ  300
AQKVIVQGQI GSEVTMRGDV GAEGIELAIP STSFQLPPSS HTSSFVEAML DQGSENFLDF  360
PNLVEEPFSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	2e-76	MYB family protein