PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021674171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GATA | ||||||||
Protein Properties | Length: 139aa MW: 15321.4 Da PI: 10.5529 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.5 | 8.8e-19 | 29 | 62 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk+ XP_021674171.1 29 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKK 62 ********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MLDPSEKGSE NEDMSSRSTE GEHQQKKTCA DCGTSKTPLW RGGPAGPKSL CNACGIRSRK 60 KKRDSLGLNR GANEKKAKKG NNHHSSSNRL RDGLKHRLLA LGREVLMQRS TVEKQRRKLG 120 EEEQAAVLLM ALSYGSVYA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 60 | 79 | KKKRDSLGLNRGANEKKAKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 2e-49 | GATA family protein |