PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674100.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 393aa MW: 45337.7 Da PI: 6.8512

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	87.2	1.9e-27	84	165	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k+++++ s +++y+++++ XP_021674100.1 84 WVQDETRSLIAFRREMDRLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGS---GSAKMSYYKEID 165 ******************************************************************84...556899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MYLSEKPRPI HFYKEELQPA TRDSMIIEVV SSNGDLPPHQ HHLHNPHQQQ PPQQPQQQQQ 60 MILGESSGED NHEVKAPKKR AETWVQDETR SLIAFRREMD RLFNTSKSNK HLWEQISAKM 120 REKGFDRSPT MCTDKWRNLL KEFKKAKHQD RGSGSAKMSY YKEIDEILRE RSKNAQYKSP 180 TPTKVDSYMQ FADKGFDDTS ISFGPVEASG RPTLNLERRL DHDGHPLAIT AAEAVAAGGV 240 PPWNWRETPG NGAESQSFGG RVITVKYGDY TRRIGIDGSA DAIKEAIKSA FRLRTKRAFW 300 LEDEDQIIRS LDRDMPVGNY TLQLDEGLVV KVCLYDDSDH LPVHTEEKIF YTEDDYRDFL 360 TRRGWSCLRE FDGYRNIDNM DDLRPGAIYR GVS

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MYLSEKPRPI HFYKEELQPA TRDSMIIEVV SSNGDLPPHQ HHLHNPHQQQ PPQQPQQQQQ  60
MILGESSGED NHEVKAPKKR AETWVQDETR SLIAFRREMD RLFNTSKSNK HLWEQISAKM  120
REKGFDRSPT MCTDKWRNLL KEFKKAKHQD RGSGSAKMSY YKEIDEILRE RSKNAQYKSP  180
TPTKVDSYMQ FADKGFDDTS ISFGPVEASG RPTLNLERRL DHDGHPLAIT AAEAVAAGGV  240
PPWNWRETPG NGAESQSFGG RVITVKYGDY TRRIGIDGSA DAIKEAIKSA FRLRTKRAFW  300
LEDEDQIIRS LDRDMPVGNY TLQLDEGLVV KVCLYDDSDH LPVHTEEKIF YTEDDYRDFL  360
TRRGWSCLRE FDGYRNIDNM DDLRPGAIYR GVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein