PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674099.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 398aa MW: 45894.4 Da PI: 6.8481

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	87.2	1.9e-27	84	165	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k+++++ s +++y+++++ XP_021674099.1 84 WVQDETRSLIAFRREMDRLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGS---GSAKMSYYKEID 165 ******************************************************************84...556899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MYLSEKPRPI HFYKEELQPA TRDSMIIEVV SSNGDLPPHQ HHLHNPHQQQ PPQQPQQQQQ 60 MILGESSGED NHEVKAPKKR AETWVQDETR SLIAFRREMD RLFNTSKSNK HLWEQISAKM 120 REKGFDRSPT MCTDKWRNLL KEFKKAKHQD RGSGSAKMSY YKEIDEILRE RSKNAQYKSP 180 TPTKVDSYMQ FADKGFDDTS ISFGPVEVPW CAASGRPTLN LERRLDHDGH PLAITAAEAV 240 AAGGVPPWNW RETPGNGAES QSFGGRVITV KYGDYTRRIG IDGSADAIKE AIKSAFRLRT 300 KRAFWLEDED QIIRSLDRDM PVGNYTLQLD EGLVVKVCLY DDSDHLPVHT EEKIFYTEDD 360 YRDFLTRRGW SCLREFDGYR NIDNMDDLRP GAIYRGVS

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MYLSEKPRPI HFYKEELQPA TRDSMIIEVV SSNGDLPPHQ HHLHNPHQQQ PPQQPQQQQQ  60
MILGESSGED NHEVKAPKKR AETWVQDETR SLIAFRREMD RLFNTSKSNK HLWEQISAKM  120
REKGFDRSPT MCTDKWRNLL KEFKKAKHQD RGSGSAKMSY YKEIDEILRE RSKNAQYKSP  180
TPTKVDSYMQ FADKGFDDTS ISFGPVEVPW CAASGRPTLN LERRLDHDGH PLAITAAEAV  240
AAGGVPPWNW RETPGNGAES QSFGGRVITV KYGDYTRRIG IDGSADAIKE AIKSAFRLRT  300
KRAFWLEDED QIIRSLDRDM PVGNYTLQLD EGLVVKVCLY DDSDHLPVHT EEKIFYTEDD  360
YRDFLTRRGW SCLREFDGYR NIDNMDDLRP GAIYRGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein