PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021674003.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 511aa MW: 55763.5 Da PI: 9.7777

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021674003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	67	89	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_021674003.1 67 FICEICNKGFQRDQNLQLHRRGH 89 89*******************88 PP
2	zf-C2H2	12.7	0.00038	144	166	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_021674003.1 144 WKCEKCSKKYAVQSDWKAHSKTC 166 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MQMMSGDTFS IPSSIPGFAH QEQNANPNPK TNPNPVPKKK RNLPGTPDPD AEVIALSPKT 60 LMATNRFICE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRTN KEVIKKKVYI CPEKTCVHHD 120 PSRALGDLTG IKKHYSRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE YKCDCGTLFS 180 RKDSFITHRA FCDALAEESA RINSASATNL NFRNDTVNLP REVTGGVVQD IIGISQFNSG 240 FRPDFNGLPS LSAQQKTGLS LWLNQANSQI NPADIVPNHS NLYASSSSTG LPEMVQMGSN 300 LYGSSSTTNF GNLTLSGLPH GLKEEEGGNN VPNMVDSLPS LYSDNHQNKQ SKPAASMSAT 360 ALLQKAAQMG STRSNQSFFG SNNYGLMSSS SSSNTTNLNT LNQNRNELHQ VFQNVNKQPE 420 SNLRVTSSVA IGDAIMVGSS GLDQVVMQSS GKRNDPIHLK VQPGSSSLES GLTRDFLGMS 480 GQSGSPFSPQ ELAKFASMSS AMGLSQFTSN P

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MQMMSGDTFS IPSSIPGFAH QEQNANPNPK TNPNPVPKKK RNLPGTPDPD AEVIALSPKT  60
LMATNRFICE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRTN KEVIKKKVYI CPEKTCVHHD  120
PSRALGDLTG IKKHYSRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTRE YKCDCGTLFS  180
RKDSFITHRA FCDALAEESA RINSASATNL NFRNDTVNLP REVTGGVVQD IIGISQFNSG  240
FRPDFNGLPS LSAQQKTGLS LWLNQANSQI NPADIVPNHS NLYASSSSTG LPEMVQMGSN  300
LYGSSSTTNF GNLTLSGLPH GLKEEEGGNN VPNMVDSLPS LYSDNHQNKQ SKPAASMSAT  360
ALLQKAAQMG STRSNQSFFG SNNYGLMSSS SSSNTTNLNT LNQNRNELHQ VFQNVNKQPE  420
SNLRVTSSVA IGDAIMVGSS GLDQVVMQSS GKRNDPIHLK VQPGSSSLES GLTRDFLGMS  480
GQSGSPFSPQ ELAKFASMSS AMGLSQFTSN P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-108	C2H2 family protein