PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021673745.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 315aa    MW: 34567.9 Da    PI: 8.3778
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021673745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH39.21.2e-12137163127
                     --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                     yktelCr +  +G+C+yG++C+F Hg+
  XP_021673745.1 137 YKTELCRSWEDFGHCRYGSKCQFVHGK 163
                     9************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDALHSSKQM PKLKSSNGSV SPLNTLLNSD STLIRYLCGG SRISSSACNV TNDAFSSRAI  60
TANSSNFGRS LSPLSSIENV MSSPVYGTPV KVVDDEVLVM DEILVDSLSG GKVLRSLSSN  120
SSDSPSNSSS SPQIRVYKTE LCRSWEDFGH CRYGSKCQFV HGKEELRPTC YPMKNEAETH  180
TFKSHSAASY SYGQKSRFLM AEAVVAASQT ASVSKPDYKN KSPVISIQSV YFSKNTNPII  240
TPMHCTKPEV YIKSPTASVK PQDWSPLDDD IEVALPGEID KYSSPRKDVD AYIHSVLHGS  300
RIRKRLPVFT EFCLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.13e-08C3H family protein