PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021673525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 202aa MW: 23093.9 Da PI: 7.5031 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 77.9 | 7.5e-25 | 9 | 56 | 1 | 48 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 krien rqvtf+kRr g+lKKA+ELSvLCdae+ v ifss+gk+y+ XP_021673525.1 9 KRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGVFIFSSHGKFYD 56 79********************************************97 PP | |||||||
2 | K-box | 53.3 | 1.2e-18 | 86 | 178 | 10 | 100 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedL..esLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 e+++ ++e++ Lkkeie Lq+ +R l+G + ++++ eL Le++Le + +iRs+K+e++ ++i+ l++ke l+ +n++L+ k+ee XP_021673525.1 86 ESTQPLDAKEEINMLKKEIEILQKGLRYLVGGGAahAQMTMDELLILEKNLEIWICHIRSTKMEIMSKEIQLLRNKEGVLKAANQYLQDKIEE 178 556666789*********************97752268****************************************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 202 aa Download sequence |
MARGKVQMKR IENPVHRQVT FCKRRSGLLK KAKELSVLCD AEIGVFIFSS HGKFYDLATN 60 GSMQGLIEKY MKVTGGSLEP DEQAKESTQP LDAKEEINML KKEIEILQKG LRYLVGGGAA 120 HAQMTMDELL ILEKNLEIWI CHIRSTKMEI MSKEIQLLRN KEGVLKAANQ YLQDKIEETV 180 EITNFEPMTP YPLTIQNDIF QF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G71692.1 | 2e-78 | MIKC_MADS family protein |