PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021673396.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | bHLH | ||||||||
Protein Properties | Length: 464aa MW: 50941 Da PI: 5.6863 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.8 | 7e-07 | 355 | 379 | 7 | 30 |
HHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 7 erErrRRdriNsafeeLrellPk.a 30 ++ErrRR+++N+++ Lr+++Pk + XP_021673396.1 355 MAERRRRKKLNDRLYMLRSVVPKiS 379 79********************954 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 464 aa Download sequence |
MLSGLNGSVW TEDKEAQKST ANNNNISNSC DVMESKEEMG SLSTFKSMLE VEEDWYVTNS 60 TIHNHQDTIR DITFSPNLTD PDNLLLHPVD SSSSCSPNSS VFNNLDPSQV HYFMHSKPTL 120 SSLLNVVSNP LEHDFDLGEI GFLENQATTT TTTNASPLLN RGGGVLGNYT DLSPNNLLST 180 SNLCSDPLFS TTRTLQLPES GSGFTGFRAF VENSGNTLFL NRSKLLRPLE TFPSMGAQPT 240 LFQKRAALRK NLTDNGSNLG VLSGIEIDKG KREMTQLGEE NEKKRKLGNL DDTVEDVSID 300 GSGLNYDSDE LTENIKMEEI GKNGGNSSNA NSSVTGGGVG DQRGKKKGLP AKNLMAERRR 360 RKKLNDRLYM LRSVVPKISK VEVRVRDGRA VNIHMFCSRR PGLLLSTMRA LDNLGLDIQQ 420 AVISCFNGFA MDIFRAEQSR EGQDVHPEQI KAVLLDSAGF HGII |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 345 | 363 | KKKGLPAKNLMAERRRRKK |
2 | 357 | 364 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12860.1 | 6e-47 | bHLH family protein |