PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021673370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | Trihelix | ||||||||
Protein Properties | Length: 258aa MW: 29605.3 Da PI: 6.3688 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 75.4 | 9e-24 | 40 | 133 | 1 | 85 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 rW+k+e+ +Lie+++ +e+r+ rg+ +++p+W+++s++++++g++r+p+qC+++w+nl +++kkik +e++r + +++ + + +++ XP_021673370.1 40 RWSKEETFVLIEGKKVVENRVCRGRrstsalgsdQIQPKWDSISSYCKQHGVNREPVQCRKRWSNLLGDFKKIKIWESQRIDADETFWNMRNEV 133 8********************9986666777777**********************************************88888788877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MAPDSIDGQP FTTLPEPDKI QKHHALDAIC NGFKATRHPR WSKEETFVLI EGKKVVENRV 60 CRGRRSTSAL GSDQIQPKWD SISSYCKQHG VNREPVQCRK RWSNLLGDFK KIKIWESQRI 120 DADETFWNMR NEVRRERKLP SFFDRDVYDI LNGRLFATEA IPLTLVTVKT EKNTDGDEAA 180 AAAAAAEEQE EEDEAVFHSG QNATSDCLFS DFEQSRQDEI RCSLKKETIA TKDLSRTQPI 240 SGNRVPNLCF LFIFFIFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-58 | Trihelix family protein |