PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672948.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 580aa MW: 65344.6 Da PI: 6.2708

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672948.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.6e-05	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F + +L+ H+r H XP_021672948.1 80 FECKVCGKQFEFPRSLHGHMRHH 102 89*******************99 PP
2	zf-C2H2	20.5	1.3e-06	111	132	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cgk F++ +L+ H+r+H XP_021672948.1 111 RCKECGKGFRTLKSLTGHMRLH 132 7*******************99 PP
3	zf-C2H2	11.4	0.00097	411	433	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k F++ L H+ H XP_021672948.1 411 FQCRICNKIFPTYQALGGHQTFH 433 89************999999877 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MEQVHEKKHV CKLCNKSFLN GRILGGHMKI HVARDSANEQ VKLESSNMGI DGYGLRENPK 60 KSWKSSSLNP DDFVSVQESF ECKVCGKQFE FPRSLHGHMR HHSAAERKGI RCKECGKGFR 120 TLKSLTGHMR LHAEKNRVSK ESRTSSSPNL VVMTLSDTET VSLVRRKRSN RMRYKVTPNS 180 SFSSVNESVP GFEVEEELEE VAMCLMMLSR GVCKWGEFKS IGESLDDDFV YFEAKSLYQN 240 KQMEGRSENG DDVFEDNEPV KKKKPREQKL DPYASDTMNK SSECSECDCD MVCNGEKEIP 300 LEVPIEKFYR GVDSKGRKLE DESGLLLCDT EIEKGIHDEM DSSAAESESS QEFTEEVGLD 360 LAGPENVKCT PSNKPIPEAC DTEMGKDSCT EMICSTSDFG TADDTKNKSQ FQCRICNKIF 420 PTYQALGGHQ TFHRTTKSSV ALKIEEHQAG IETNLLAEKF DLANKLVKLE CIKDSVQGEV 480 NEVIITSYQS KKRKEHKCHI CSKNFVSGQA LGGHKRAHHP KAREEQNMTM KQEGLDICNA 540 PDISVTDMLD TEANREVGFE SWWAGIRSYK HESLADLIAN

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MEQVHEKKHV CKLCNKSFLN GRILGGHMKI HVARDSANEQ VKLESSNMGI DGYGLRENPK  60
KSWKSSSLNP DDFVSVQESF ECKVCGKQFE FPRSLHGHMR HHSAAERKGI RCKECGKGFR  120
TLKSLTGHMR LHAEKNRVSK ESRTSSSPNL VVMTLSDTET VSLVRRKRSN RMRYKVTPNS  180
SFSSVNESVP GFEVEEELEE VAMCLMMLSR GVCKWGEFKS IGESLDDDFV YFEAKSLYQN  240
KQMEGRSENG DDVFEDNEPV KKKKPREQKL DPYASDTMNK SSECSECDCD MVCNGEKEIP  300
LEVPIEKFYR GVDSKGRKLE DESGLLLCDT EIEKGIHDEM DSSAAESESS QEFTEEVGLD  360
LAGPENVKCT PSNKPIPEAC DTEMGKDSCT EMICSTSDFG TADDTKNKSQ FQCRICNKIF  420
PTYQALGGHQ TFHRTTKSSV ALKIEEHQAG IETNLLAEKF DLANKLVKLE CIKDSVQGEV  480
NEVIITSYQS KKRKEHKCHI CSKNFVSGQA LGGHKRAHHP KAREEQNMTM KQEGLDICNA  540
PDISVTDMLD TEANREVGFE SWWAGIRSYK HESLADLIAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	4e-24	C2H2 family protein