PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672876.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 250aa MW: 28559.6 Da PI: 8.4524

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.8	1.1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_021672876.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	96.9	3e-32	83	171	10	98
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++s +qe+ kL++++e Lqr+qRhllGedL++L+ keL+qLe+qLe+sl++iRskK++++l+q+ +lq++e+ l e+nkaL++kl XP_021672876.1 83 PGHETQSNYQEYLKLQARVEVLQRSQRHLLGEDLGPLNTKELEQLEHQLETSLNQIRSKKTQFMLDQLVDLQNREHLLLETNKALKRKL 171 557899********************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST 60 SSMMRTLERY QKCSYGALEA SQPGHETQSN YQEYLKLQAR VEVLQRSQRH LLGEDLGPLN 120 TKELEQLEHQ LETSLNQIRS KKTQFMLDQL VDLQNREHLL LETNKALKRK LLLHTNYQLE 180 EGSGQVPLLL AWEDGGQTIP YSRLPAHSEG FFHPLGGNST LQIGYNPVGA DEINVAHTQH 240 VNGFIPGWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-106	MIKC_MADS family protein