PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672799.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 379aa MW: 42788.7 Da PI: 4.6888

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	6.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+lv++++ G g+W+++++ g+ R++k+c++rw +yl XP_021672799.1 14 KGRWTAEEDEKLVNYIQANGEGSWRSVPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	44.7	3.2e-14	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+e+++++++ lG++ W++Ia+ ++ gRt++++k++w ++l XP_021672799.1 67 RGSISADEEEIILQLHASLGNR-WSLIASPLP-GRTDNEIKNYWSSHL 112 78889***************.*****.*********8875 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MGRAPCCEKV GLKKGRWTAE EDEKLVNYIQ ANGEGSWRSV PKNAGLLRCG KSCRLRWINY 60 LRADLKRGSI SADEEEIILQ LHASLGNRWS LIASPLPGRT DNEIKNYWSS HLSRKVHIFS 120 RLGNENRPLA IHKAKLMMGS NKQRKADRFA MKNNKSHVRK EPWASTKGGL EQICIGPDPS 180 KDGDGIRPTL QTPVLVKETL SVASEDTAIL DPRVEDEDKV QTDLVIPSPC QERAEGEGEG 240 LVLHLSEEEQ SEMLGPYHGF AGKMLLFDDN IQDELLDAEQ EDDVSLTSLE GEKKSTVRSE 300 DQREKENGKL SSNDDLYVCS STAYSFDEWS WENLMQWDEN VDNTIFSIWE SDNSELGDVQ 360 KQEEIDHDKQ NASVAWLLS

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MGRAPCCEKV GLKKGRWTAE EDEKLVNYIQ ANGEGSWRSV PKNAGLLRCG KSCRLRWINY  60
LRADLKRGSI SADEEEIILQ LHASLGNRWS LIASPLPGRT DNEIKNYWSS HLSRKVHIFS  120
RLGNENRPLA IHKAKLMMGS NKQRKADRFA MKNNKSHVRK EPWASTKGGL EQICIGPDPS  180
KDGDGIRPTL QTPVLVKETL SVASEDTAIL DPRVEDEDKV QTDLVIPSPC QERAEGEGEG  240
LVLHLSEEEQ SEMLGPYHGF AGKMLLFDDN IQDELLDAEQ EDDVSLTSLE GEKKSTVRSE  300
DQREKENGKL SSNDDLYVCS STAYSFDEWS WENLMQWDEN VDNTIFSIWE SDNSELGDVQ  360
KQEEIDHDKQ NASVAWLLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	2e-70	MYB family protein