PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021672758.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GATA | ||||||||
Protein Properties | Length: 135aa MW: 14928.4 Da PI: 9.4612 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57 | 2.6e-18 | 31 | 64 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C C+tt Tp+WR+gp+g+ktLCnaCG++yrkk+ XP_021672758.1 31 CIDCHTTRTPCWRSGPEGPKTLCNACGIRYRKKR 64 889*****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MMIVDLNTNG QESEGMYNTS PAKGGELKKS CIDCHTTRTP CWRSGPEGPK TLCNACGIRY 60 RKKRWALLGL DKGRAEKCRR KMAKSSRSKL GVSLELGLVV PGRDILLQEE WKRRLGEEEQ 120 AAILLMALSC GCVSA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 76 | 82 | EKCRRKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 2e-28 | GATA family protein |