PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021672514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YC | ||||||||
Protein Properties | Length: 231aa MW: 26968.9 Da PI: 6.2231 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 135.4 | 1.6e-42 | 57 | 160 | 2 | 101 |
NF-YC 2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 l fw++q i + fk +h+lPlarik+i+k+d +vkmisae+P l+skacelfileltlr+wl++e +krrtl+++dia a+ +++ dfl XP_021672514.1 57 LAIFWNQQlleIHNIPAFKsHHQLPLARIKRIMKYDGEVKMISAETPLLFSKACELFILELTLRAWLQTEVCKRRTLQRCDIARAIRTSHTLDFL 151 778*****87777788899889************************************************************************* PP NF-YC 93 vdivprdel 101 ++vp d++ XP_021672514.1 152 AEVVPFDHH 160 *****9965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MDLNQSIEFN LSSSISPQLH NFMPMSCFLL PTYHHSTEEG CEESRNSHFM QVLKQNLAIF 60 WNQQLLEIHN IPAFKSHHQL PLARIKRIMK YDGEVKMISA ETPLLFSKAC ELFILELTLR 120 AWLQTEVCKR RTLQRCDIAR AIRTSHTLDF LAEVVPFDHH KDGETENCSD ELEPLPAIQV 180 PFPVIDINED FVLTNHGIAQ QFMMRTSTSP VEFNYEFDFK FNCKPLQKHN F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 1e-37 | NF-YC family protein |