PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671888.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 794aa MW: 87466.7 Da PI: 6.1055

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.3	3.3e-19	283	383	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ l+++d +gr+W++++++ +++s++yvl+ G ++ +L++gD+++F+ +++ +++ XP_021671888.1 283 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPLRIQDVKGREWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTITFS-QKDPGGK 375 99************************555556677***********99899999999.*******************.4559999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_021671888.1 376 LVIGFRKA 383 99999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 794 aa Download sequence
MEEGLAFAIW WICLSLLYLR RLHCGCIASS SLLEILDFGG IGCTSCTRSS QLHSIHSYDI 60 SNCFGSSTTN NAGDLESFPP ENQVAASTLN EGKLAQLCRL MEANEPNLLC QSEGPDKNAS 120 LGQFRQEEIV QIIGEAGIGF SDASQSSVGE SKFANPDTIR SILEMKDMHG SLAPSLSMTL 180 GAPSGTTSFV PYPCGVVEGR DKSKTPPFQQ GQSSRPILPK PSKPGPAGSS KTSKAVVPEL 240 RIARPPAEGQ GKNQLLPRYW PRITDQELQK LSGDLNSNIV PLFEKVLSAS DAGRIGRLVL 300 PKACAEAYFP PISQSEGLPL RIQDVKGREW TFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ 360 AGDTITFSQK DPGGKLVIGF RKARNNSDMQ EAQTTALPIA VGDIGWNKGG SHGGTINGDA 420 QSLAMAEKKR TRNIGPKSKR LLMHSEDALE LRLTWEEAQD LLRPPPNVKP SIVTIEDHEL 480 EEYDEPPVFG KRTIFTDRSS WGQEQWAQCD DCSKWRKLPE DALLPPKWTC SDNVCDSSRC 540 SCSAPEEMSP KDLDNLLRVS KDFKKRRILE RHKPSPDREL SGLDALASAA VLGDNIGDSD 600 EPLVGATTKH PRHRPGCTCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT LMLRKKKRQS 660 EREAEISQGN NDRKDESEMI STLSDALLTV NNSENEVGPN KKQTEVAETS AGQIDLNCHP 720 NREEMQVDVP GLSMMNIDEP FDNYIKQNGL ANLMCERQSS FASCLHSQTN GENLRRLSDE 780 AYPEDSMDSN PRGD

Sequence ? help Back to Top

Protein Sequence Length: 794 aa Download sequence

MEEGLAFAIW WICLSLLYLR RLHCGCIASS SLLEILDFGG IGCTSCTRSS QLHSIHSYDI  60
SNCFGSSTTN NAGDLESFPP ENQVAASTLN EGKLAQLCRL MEANEPNLLC QSEGPDKNAS  120
LGQFRQEEIV QIIGEAGIGF SDASQSSVGE SKFANPDTIR SILEMKDMHG SLAPSLSMTL  180
GAPSGTTSFV PYPCGVVEGR DKSKTPPFQQ GQSSRPILPK PSKPGPAGSS KTSKAVVPEL  240
RIARPPAEGQ GKNQLLPRYW PRITDQELQK LSGDLNSNIV PLFEKVLSAS DAGRIGRLVL  300
PKACAEAYFP PISQSEGLPL RIQDVKGREW TFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ  360
AGDTITFSQK DPGGKLVIGF RKARNNSDMQ EAQTTALPIA VGDIGWNKGG SHGGTINGDA  420
QSLAMAEKKR TRNIGPKSKR LLMHSEDALE LRLTWEEAQD LLRPPPNVKP SIVTIEDHEL  480
EEYDEPPVFG KRTIFTDRSS WGQEQWAQCD DCSKWRKLPE DALLPPKWTC SDNVCDSSRC  540
SCSAPEEMSP KDLDNLLRVS KDFKKRRILE RHKPSPDREL SGLDALASAA VLGDNIGDSD  600
EPLVGATTKH PRHRPGCTCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT LMLRKKKRQS  660
EREAEISQGN NDRKDESEMI STLSDALLTV NNSENEVGPN KKQTEVAETS AGQIDLNCHP  720
NREEMQVDVP GLSMMNIDEP FDNYIKQNGL ANLMCERQSS FASCLHSQTN GENLRRLSDE  780
AYPEDSMDSN PRGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	645	656	KRRFKTLMLRKK
2	645	658	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein