PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671693.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 854aa MW: 98143.2 Da PI: 5.8828

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.5	3.5e-26	75	161	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++YA+ vGFsvrk+ ++sk +g +++r+f+Cskeg+r+++k++ + +++r+etrtgC a+l ++++ dgk++vt++e eHnH+ XP_021671693.1 75 SFYSKYARLVGFSVRKDWVNRSKVHGLVVSRKFTCSKEGYRRKDKRD-ANVKKHRKETRTGCLAHLIITRQPDGKYRVTHFEAEHNHD 161 5*****************************************999.99999********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 854 aa Download sequence
MSRDEDDLVS PHDEDMDVGL QTSDRLDLNL DQDCHNPNVA QVTGAQCSLS SKGDSITNGV 60 LKIGTEFESD EHAYSFYSKY ARLVGFSVRK DWVNRSKVHG LVVSRKFTCS KEGYRRKDKR 120 DANVKKHRKE TRTGCLAHLI ITRQPDGKYR VTHFEAEHNH DSINPNNVQT LPFQKELCVT 180 EAAEADLPSN LGAESNSAFE LMNRRFEVGE SLDYIAMDFD NYLQSERVRD MKRGEAGRLL 240 RYFQRLHFES PTFFHAIQVD IDDKISNIFW ADDTMVVDYD HFGDVICLDT TYRTNKDIQP 300 FVQFIGVNHH NQAVTFAAAL LFDDTVESLK WLFRTFLEAM SGKKPKVILT DQDAAIVEAI 360 KSVLPETSHR ICVWQMCQNA LNHLSHALKD TESFSSDFRS CIYDLNDEED FIHAWEALLD 420 KYSLQQNEWL RWMFREREKW AIVYGMNTFF LDARGCHVAE DLHRNLRSNL SSDQDALQFF 480 KVFERMVDEQ RFKELQANDE MTRCMPRLMG NVVLLKHASD MYTPKAFEIF QKEYEKCLNF 540 VVSQCSESSL FLEYKVNTFG RSREYTVTFN PSDDTVICSC RKFENVGFLC GHALKVLDQK 600 NIKVLPSKYI LKRWTKDARI GYVRESKEFI AQENPKLVAG SRYKALCRRM LKISARATES 660 EEAFQFASRQ LDQMIEAVEK ILTIKHEEAH GIASSSTAAN VSESGNAEIF LDKRTVEDQD 720 EDNRVAGIED NDGAVPERHQ LKYMKEKSSK KHGFPSALPP APDTDTFVSS PQQACVSTEA 780 LTSNPLLQQN PVISHQDNPN LYQPSNFYSD QHDSSRQTPL LQAMDLDLQH PQPSSFMLYD 840 LRYRASDTSF LGSK

Sequence ? help Back to Top

Protein Sequence Length: 854 aa Download sequence

MSRDEDDLVS PHDEDMDVGL QTSDRLDLNL DQDCHNPNVA QVTGAQCSLS SKGDSITNGV  60
LKIGTEFESD EHAYSFYSKY ARLVGFSVRK DWVNRSKVHG LVVSRKFTCS KEGYRRKDKR  120
DANVKKHRKE TRTGCLAHLI ITRQPDGKYR VTHFEAEHNH DSINPNNVQT LPFQKELCVT  180
EAAEADLPSN LGAESNSAFE LMNRRFEVGE SLDYIAMDFD NYLQSERVRD MKRGEAGRLL  240
RYFQRLHFES PTFFHAIQVD IDDKISNIFW ADDTMVVDYD HFGDVICLDT TYRTNKDIQP  300
FVQFIGVNHH NQAVTFAAAL LFDDTVESLK WLFRTFLEAM SGKKPKVILT DQDAAIVEAI  360
KSVLPETSHR ICVWQMCQNA LNHLSHALKD TESFSSDFRS CIYDLNDEED FIHAWEALLD  420
KYSLQQNEWL RWMFREREKW AIVYGMNTFF LDARGCHVAE DLHRNLRSNL SSDQDALQFF  480
KVFERMVDEQ RFKELQANDE MTRCMPRLMG NVVLLKHASD MYTPKAFEIF QKEYEKCLNF  540
VVSQCSESSL FLEYKVNTFG RSREYTVTFN PSDDTVICSC RKFENVGFLC GHALKVLDQK  600
NIKVLPSKYI LKRWTKDARI GYVRESKEFI AQENPKLVAG SRYKALCRRM LKISARATES  660
EEAFQFASRQ LDQMIEAVEK ILTIKHEEAH GIASSSTAAN VSESGNAEIF LDKRTVEDQD  720
EDNRVAGIED NDGAVPERHQ LKYMKEKSSK KHGFPSALPP APDTDTFVSS PQQACVSTEA  780
LTSNPLLQQN PVISHQDNPN LYQPSNFYSD QHDSSRQTPL LQAMDLDLQH PQPSSFMLYD  840
LRYRASDTSF LGSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein