PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021671685.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 781aa    MW: 86171.4 Da    PI: 6.881
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021671685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.38.4e-2185141157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     ++k  ++t++q++eLe +F+++++p++++r eL+++lgL+ +q+k+WFqNrR+++k+
  XP_021671685.1  85 KKKYNRHTPHQIQELEIFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKN 141
                     789999************************************************995 PP
2START187.85.7e-592905132206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     la++a++el+k a+ ++p+W ks     + +n++e++++f++  +     + +ea r++g+v+ ++  lve+l+d++ +W e ++    +a+t++
  XP_021671685.1 290 LALAAMDELIKIAQIDSPLWIKSLeggkDALNYEEYMRTFSPCIGvkpssFVTEATRETGIVIINSLALVETLMDVN-RWVEAFPgliaRASTID 383
                     6899*************************************99889***99**************************.***************** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     vissg      galq+m+ae+q+ sp vp R + f+R+++q+ +g+w++vdvS+d +q+ + s +++ ++++pSg+++++++ng skvtwveh  
  XP_021671685.1 384 VISSGmggtknGALQVMQAEFQVVSPFVPvRQVRFLRFCKQHAEGVWAVVDVSIDANQESSISFPFAACRRFPSGCIMQDMPNGCSKVTWVEHSQ 478
                     ************************************************************99********************************* PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++ +h+l+rs+++sg+ +ga +w+atlqr+ce+
  XP_021671685.1 479 YDESAVHQLYRSVLSSGRGFGAHRWLATLQRYCEC 513
                     *********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 781 aa     Download sequence    
MHSGGIGHRP PVVTPSIPKS PALSLSLKGN MDTHGDMGLL GEHLDPIIVG RIKEDGYESR  60
SGSDNNLEGA SGDDQGAGED QRCRKKKYNR HTPHQIQELE IFFKECPHPD EKQRSELSRR  120
LGLESKQIKF WFQNRRTQMK NQLERQENII LRQENEKLRA ENELLKQNMT DPICNNCGSP  180
VVPGPVSYEQ QQLRIENGRL KDELGRVCAL ANKFLGRPLS SSFCPIPPFG SNSKLDLSVG  240
RSGYGGICNV ETTLPFGLDY GGGFTMPLMK PTTSPMLNEV PYDRSMFIDL ALAAMDELIK  300
IAQIDSPLWI KSLEGGKDAL NYEEYMRTFS PCIGVKPSSF VTEATRETGI VIINSLALVE  360
TLMDVNRWVE AFPGLIARAS TIDVISSGMG GTKNGALQVM QAEFQVVSPF VPVRQVRFLR  420
FCKQHAEGVW AVVDVSIDAN QESSISFPFA ACRRFPSGCI MQDMPNGCSK VTWVEHSQYD  480
ESAVHQLYRS VLSSGRGFGA HRWLATLQRY CECTSVLMSP TISGDDQTVI NISGKKSMVK  540
LAQRMVDNFC SGVCASSLHK WDKLLVGNVS EDIRILTRKN INEPGKPPGI VLSAATSVWL  600
PVMRERLFDF LRDERSRSEW DILSHGGMMQ EMVHISKGHC RGNCVSLLRS SAVCPNANES  660
SMIILQETWN DASSSLVVYA PIDIASMTLV MNGGDSNYVA LLPSGFVILS DDPISQGGAN  720
FCNGTLIKRD SDGGDGGGSL LTVGFQILVN NLRTAKLTLE SVETVNSLIS RTIQRIKQCF  780
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein