PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021671436.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family CO-like
Protein Properties Length: 337aa    MW: 37039.6 Da    PI: 5.9865
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021671436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box26.51.3e-08436436
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36
                    + C+ +++  ++lfC+ ++ +lC +C ++ H  
  XP_021671436.1  4 KLCDSCKSATATLFCRADSAFLCVNCDSKVHAA 36
                    68***************************9954 PP
2zf-B_box27.75.4e-094691342
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                     ++C+ +e+ +++  C+ +   lC +C   +H+       H++vp+
  XP_021671436.1 46 VWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSAnplarrHERVPV 91
                    689*****************************66899999*99986 PP
3CCT70.15.5e-24275317143
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 
                     Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k+
  XP_021671436.1 275 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKR 317
                     9****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MASKLCDSCK SATATLFCRA DSAFLCVNCD SKVHAANKLA SRHARVWVCE VCEQAPAHVT  60
CKADAAALCV TCDRDIHSAN PLARRHERVP VTPFYESVGS VKPNAVNFLD DRYFSDVDGD  120
VDVSREEAEA ASWLLPNPPN PKLMESPDLN TGQYVFSDMD PYMDPGCGPV TVDPKLEAQE  180
QNSSGTDGVV PVQSKTVQVP LVNDHCFELD FTGSKPFAYG YDTQCLSNSV SSSSVDVGVV  240
PDGGNMTDIS NAYCKTVSNG MESTNATVQQ TAVDREARVL RYREKRKNRK FEKTIRYASR  300
KAYAETRPRI KGRFAKRIDI EVEADRGSIY GFVVPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24930.11e-146CO-like family protein