PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021670216.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CO-like

Protein Properties

Length: 377aa MW: 41684.3 Da PI: 7.0875

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021670216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24	7.8e-08	58	90	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 + C+ +++ ++lfC+ + +lC +C ++ H XP_021670216.1 58 KLCDSCKSATATLFCRADTAFLCINCDSKVHAA 90 68***************************9954 PP
2	zf-B_box	24.2	7.2e-08	100	145	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ +++ C+ + lC +C +H H++vp+ XP_021670216.1 100 VWVCEVCEQAPAHVTCKADAAALCVTCDRDIHCAnplarrHERVPV 145 689*****************************66688888999986 PP
3	CCT	69.8	7.1e-24	314	357	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkF+K+irY+sRKa+Ae+RpR+KGrF+k++ XP_021670216.1 314 REARVLRYREKRKNRKFQKTIRYASRKAYAETRPRIKGRFAKRS 357 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MCLSSICWFP DLPGPTTLTH SIILAPLATV NGKYTKEDCA RPARVHLFIR IYLVMAYKLC 60 DSCKSATATL FCRADTAFLC INCDSKVHAA NKLASRHARV WVCEVCEQAP AHVTCKADAA 120 ALCVTCDRDI HCANPLARRH ERVPVTPFYE SVGSAPAVKP NAVNFLDDCY LSDVDGDADV 180 NREEAETASW LLPNPPNPKV MESAGLITGS YVFSDMDPYL NLDYAPPVDP KLEEQEQNGS 240 GTDGVVPVQS KSVQARLVND LCFDFDFTGS KPFANGYNTQ CLSHSVSSSS LDIGVVPDSM 300 ESTNQTVQLS AVDREARVLR YREKRKNRKF QKTIRYASRK AYAETRPRIK GRFAKRSDIE 360 VEVDRSSIYG FGVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MCLSSICWFP DLPGPTTLTH SIILAPLATV NGKYTKEDCA RPARVHLFIR IYLVMAYKLC  60
DSCKSATATL FCRADTAFLC INCDSKVHAA NKLASRHARV WVCEVCEQAP AHVTCKADAA  120
ALCVTCDRDI HCANPLARRH ERVPVTPFYE SVGSAPAVKP NAVNFLDDCY LSDVDGDADV  180
NREEAETASW LLPNPPNPKV MESAGLITGS YVFSDMDPYL NLDYAPPVDP KLEEQEQNGS  240
GTDGVVPVQS KSVQARLVND LCFDFDFTGS KPFANGYNTQ CLSHSVSSSS LDIGVVPDSM  300
ESTNQTVQLS AVDREARVLR YREKRKNRKF QKTIRYASRK AYAETRPRIK GRFAKRSDIE  360
VEVDRSSIYG FGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	1e-136	CO-like family protein