PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669772.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-PHD

Protein Properties

Length: 932aa MW: 102749 Da PI: 4.7145

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	39.5	9.6e-13	823	864	11	52
HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 ++ L + F++n+yp+++++e LAk+lg+t rqV+ WF N R XP_021669772.1 823 VTQGLYKSFRENQYPNRTTKESLAKELGITFRQVTKWFENTR 864 67889***********************************99 PP
2	PHD	38.3	3.1e-13	461	516	1	51
SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ +++++++lCd +C++ fH+ Cl ++l +e++p + wlC+ C++k XP_021669772.1 461 FCAKCGAedLTADNDIILCDgTCDRGFHQFCLVPPLLKEDIPPDdeGWLCPGCDCK 516 69999977778*****56***************99999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence
MFKSELMGVS PSQISCHTKS YSCPKHSRPG ETPEYDVECK CTEISEQRHW ITSETVQIEP 60 GDTVTVVSQC GTSEALQQSS EDATKNTLAE NLDPPSEDAR KSGLTDKSLG PKLTAIDQKL 120 EFGSEDTRSG PSKEQYSLSS GIIQDQNALS TFTIDETLQR LCADAAKNSL AKDLELPCEE 180 ASKSSQIGKS PCPKQSTSER TLEFSSDIAC CEPSLEKRKA CCDIVKGELV EISTTLSSCT 240 ATGHLEPPPV LVTYLGLAPD SEINIPDEKL RPPHDEVDKH SNLERSETPS KDAVSNSSQV 300 GRRVKTTAKS SRKKYILRSL VRSDRVLRSR SQEKSKSPDS SANLANVSSK IEKTVTNKKK 360 RQGKIIEADE YSKIRKHLRY MLNRMSYEQS LITAYSAEGW KGLSLDKLKP EKELQRAKAE 420 IFRRKLNIRD LFQRIDSLCA EGKLPESLFD SEGQISSEDI FCAKCGAEDL TADNDIILCD 480 GTCDRGFHQF CLVPPLLKED IPPDDEGWLC PGCDCKVDCI ELLNDSQGTN ISISDSWEKV 540 FPEAAAAGQN PDQNFGLPSD DSDDNDYDPN RPEIGEKSPG NESSSDESCF TSASDELEAP 600 PGDEQHLGLP SDDSEDDDYN PDGPDLDENL MESSNSDFTS DSEGLAATLD DNELSGEDES 660 RVYIRPQGDI TREGSNHGGK QKQSLQSELL SILEPSPSQD GSVPISGKRN VERLDYKKLY 720 NETYGSISSD SSDDEDFTDT VGPRKRRKST EVAPATVNGD ASVTKTGKQD LKETEYTPKR 780 SCQQPNFENT SISPAKAHDG SSPSSSCGKT VGPSIYRRLG EAVTQGLYKS FRENQYPNRT 840 TKESLAKELG ITFRQVTKWF ENTRWSFNHS SSMDVLVRKT SKMESPLPKR TSDQTSSRTD 900 SITEKMVKLS ANLPKVQEKQ VGGRMTRSKS VA

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence

MFKSELMGVS PSQISCHTKS YSCPKHSRPG ETPEYDVECK CTEISEQRHW ITSETVQIEP  60
GDTVTVVSQC GTSEALQQSS EDATKNTLAE NLDPPSEDAR KSGLTDKSLG PKLTAIDQKL  120
EFGSEDTRSG PSKEQYSLSS GIIQDQNALS TFTIDETLQR LCADAAKNSL AKDLELPCEE  180
ASKSSQIGKS PCPKQSTSER TLEFSSDIAC CEPSLEKRKA CCDIVKGELV EISTTLSSCT  240
ATGHLEPPPV LVTYLGLAPD SEINIPDEKL RPPHDEVDKH SNLERSETPS KDAVSNSSQV  300
GRRVKTTAKS SRKKYILRSL VRSDRVLRSR SQEKSKSPDS SANLANVSSK IEKTVTNKKK  360
RQGKIIEADE YSKIRKHLRY MLNRMSYEQS LITAYSAEGW KGLSLDKLKP EKELQRAKAE  420
IFRRKLNIRD LFQRIDSLCA EGKLPESLFD SEGQISSEDI FCAKCGAEDL TADNDIILCD  480
GTCDRGFHQF CLVPPLLKED IPPDDEGWLC PGCDCKVDCI ELLNDSQGTN ISISDSWEKV  540
FPEAAAAGQN PDQNFGLPSD DSDDNDYDPN RPEIGEKSPG NESSSDESCF TSASDELEAP  600
PGDEQHLGLP SDDSEDDDYN PDGPDLDENL MESSNSDFTS DSEGLAATLD DNELSGEDES  660
RVYIRPQGDI TREGSNHGGK QKQSLQSELL SILEPSPSQD GSVPISGKRN VERLDYKKLY  720
NETYGSISSD SSDDEDFTDT VGPRKRRKST EVAPATVNGD ASVTKTGKQD LKETEYTPKR  780
SCQQPNFENT SISPAKAHDG SSPSSSCGKT VGPSIYRRLG EAVTQGLYKS FRENQYPNRT  840
TKESLAKELG ITFRQVTKWF ENTRWSFNHS SSMDVLVRKT SKMESPLPKR TSDQTSSRTD  900
SITEKMVKLS ANLPKVQEKQ VGGRMTRSKS VA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	1e-127	HB-PHD family protein