PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669687.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 588aa MW: 65676.9 Da PI: 7.9696

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.1	3.4e-12	57	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g WT+eEd +l + v+++ g+ W++Ia++++ Rt qc rw+ + XP_021669687.1 57 KGHWTEEEDYILTESVRRFHGKKWRKIAECLP-QRTVSQCFTRWNRV 102 789*************99999*****.*********986 PP
2	Myb_DNA-binding	49.9	7.2e-16	109	155	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ +++ v+++G++ W+ ar ++ gR +kqc++rw+++l XP_021669687.1 109 KGTWTKEEDDCIIESVRRYGPRKWSVMARSLP-GRLGKQCRERWHNHL 155 799***************************.***********97 PP
3	Myb_DNA-binding	37.8	4.5e-12	161	215	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...........TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...........kgRtlkqcksrwq 45 r +WT+eE++ l +++ +G++ W+ Iar ++ + +t++ +k++w+ XP_021669687.1 161 RSSWTEEEELTLTYYHEIYGNK-WTEIARFLPgrlsfwhsnflTALTDNAIKNHWN 215 789*****************.****************99********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 588 aa Download sequence
MMVMKVKEEE ELYDVDSADQ VIDAPPCSVY FGTRGAAFPR SVSFQGRATG PTRRSTKGHW 60 TEEEDYILTE SVRRFHGKKW RKIAECLPQR TVSQCFTRWN RVLNPAIVKG TWTKEEDDCI 120 IESVRRYGPR KWSVMARSLP GRLGKQCRER WHNHLDPAIR RSSWTEEEEL TLTYYHEIYG 180 NKWTEIARFL PGRLSFWHSN FLTALTDNAI KNHWNCIVKK KLDSNSPAYA EDLCKVGSLN 240 FCSCAMKTDS KEVKEERQNP DELVSVHGRM GLMCSGDMGT AELLCGLANG GQNQLEAKYG 300 MVGTSDSSVE IDELMNGIHF DDRGANGCGA MIGCRRNKSS ALEAVLPFPL NSAKSPNRLS 360 GHELGILHSE FGNETENSYS FTSATGGDRS VIEKESKFHK MNMHVQPVDR NQRCLHHESA 420 QPKDLVTNLD GADPSIGHHH VLHANSPFSC STPRNCARYT FVSGNSPESI LRNSARTFKN 480 TPSIIRKRAY KEGGLNNSSD VTCTPSWKIS CTNATSEDIN NADILNGKQG FLSFFHKPGS 540 SLAVKSLRRQ LDYAFDMERD AAAGKCGNSV PASAAPNIEL FANAMVIP

Sequence ? help Back to Top

Protein Sequence Length: 588 aa Download sequence

MMVMKVKEEE ELYDVDSADQ VIDAPPCSVY FGTRGAAFPR SVSFQGRATG PTRRSTKGHW  60
TEEEDYILTE SVRRFHGKKW RKIAECLPQR TVSQCFTRWN RVLNPAIVKG TWTKEEDDCI  120
IESVRRYGPR KWSVMARSLP GRLGKQCRER WHNHLDPAIR RSSWTEEEEL TLTYYHEIYG  180
NKWTEIARFL PGRLSFWHSN FLTALTDNAI KNHWNCIVKK KLDSNSPAYA EDLCKVGSLN  240
FCSCAMKTDS KEVKEERQNP DELVSVHGRM GLMCSGDMGT AELLCGLANG GQNQLEAKYG  300
MVGTSDSSVE IDELMNGIHF DDRGANGCGA MIGCRRNKSS ALEAVLPFPL NSAKSPNRLS  360
GHELGILHSE FGNETENSYS FTSATGGDRS VIEKESKFHK MNMHVQPVDR NQRCLHHESA  420
QPKDLVTNLD GADPSIGHHH VLHANSPFSC STPRNCARYT FVSGNSPESI LRNSARTFKN  480
TPSIIRKRAY KEGGLNNSSD VTCTPSWKIS CTNATSEDIN NADILNGKQG FLSFFHKPGS  540
SLAVKSLRRQ LDYAFDMERD AAAGKCGNSV PASAAPNIEL FANAMVIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	3e-69	MYB family protein