PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021669215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | Trihelix | ||||||||
Protein Properties | Length: 550aa MW: 63272.7 Da PI: 6.9174 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 95.8 | 3.9e-30 | 124 | 209 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+++++r++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_021669215.1 124 RWPRQETLTLLEIRSRLDSRFKEANQKGPLWDEVSRIMaEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 209 8*************************************999*****************************98..55667*******85 PP | |||||||
2 | trihelix | 63.2 | 5.7e-20 | 437 | 523 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+ e+ Li++ ++++ r+ + g +k++lWee+++km++ g+ rs +Ck+kw n+n ++ +++ +k+++e+ +t yf+ l+ XP_021669215.1 437 RWTEPEIFSLIQIITSVDPRFLEsGHSKAGLWEEIAAKMHSLGYGRSVDECKQKWGNMNIYFNMTATECNKKRKEDLRTSNYFHPLD 523 8********************97478***************************************999999999**********886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 550 aa Download sequence |
MADHQYGVPD LRQLVAGRTH FQGIPLATEP FFLQTRTHGP QIHHFHHDSI IAAAAHSGAE 60 VMLPSGFVQL AHHDHYCTNA STIPSTTTTT TIAIDAASSG AAGSFFGVEM ENGWIGNDAG 120 NYSRWPRQET LTLLEIRSRL DSRFKEANQK GPLWDEVSRI MAEEHGYQRS GKKCREKFEN 180 LYKYYKKTKE GKAGRQDGKH YRFFRQLEAL YGETSNNQTS ASETHLINNS TSFLYQTPTS 240 LTINQENQEG LQENKHSDQS LSFSNTSEFE TSSSENNDDD LSAIAYMMNR SIEKQKGLTE 300 SQSYTRAKKN WKTKVKEFVD LQMRKLLERQ EVWMERILKT IEDREQERMC KEEEWTKQEV 360 ARLDRIHEFW AKERAWIEAR DAALMEALKK HAGKGLELLL PSSTSVDEQI AIATQSHYRN 420 QDRHAKKNGI DEMNTMRWTE PEIFSLIQII TSVDPRFLES GHSKAGLWEE IAAKMHSLGY 480 GRSVDECKQK WGNMNIYFNM TATECNKKRK EDLRTSNYFH PLDPYNDQEM AKLETLNSPS 540 SNSCVSRRLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 1e-107 | Trihelix family protein |