PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669002.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 274aa MW: 30938.6 Da PI: 4.5218

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.2	8.7e-21	68	121	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k XP_021669002.1 68 KKRRLTPEQVNLLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 121 5678*************************************************9 PP
2	HD-ZIP_I/II	130.7	5.7e-42	67	158	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv+lLE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l + +++ ke+e+L++e+ XP_021669002.1 67 EKKRRLTPEQVNLLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKASYDSLLSIYDTVIKENEKLKSEVV 158 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MESGRLFFNP SSCNGNMLFL ENRDPVFREG PRLSMLNMEV DTSKKRPFFS SPEDLFDDEY 60 YEEQLPEKKR RLTPEQVNLL EKSFEAENKL EPERKTQLAK KLGLQPRQVA VWFQNRRARW 120 KTKQLERDYD LLKASYDSLL SIYDTVIKEN EKLKSEVVSL TVKLETKDVT EAPVPGQKSD 180 SVPVDTANAC GVQMGVKVED HLSSGSAGSA VVDEHSPQLL DSGDSFFQND NYGGCVIGGP 240 VDGVQSVEDD GSEVCRSYFS DVFLTTGGQL WMWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	124	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	1e-94	HD-ZIP family protein