PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021668816.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 387aa    MW: 43881.1 Da    PI: 4.8919
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021668816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.84.5e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +grWT+eEde+l+++++  G g+W++ ++  g+ R++k+c++rw +yl
   XP_021668816.1 14 KGRWTAEEDEKLIKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP

2Myb_DNA-binding52.61.1e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ +++E+e++ ++++ lG++ W++Ia++++ gRt++++k++w+++l
   XP_021668816.1  67 RGNISPDEEEIIFKLHASLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112
                      7899******************.*********.************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MGRAPCCEKV GLKKGRWTAE EDEKLIKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI SPDEEEIIFK LHASLGNRWS LIASHLPGRT DNEIKNYWNS HLSRKVHIFR  120
RTGNGSRPLV IHTAKLGMGT SKRGKTPGRY AIKNNDKRRL HKQPAASTKE PDENSTGFSK  180
DDGIVPMPQT PVLEKEILSI ASEDMAIFDT LLEDEDREHM NLVIPSPFQE KTEGEGERLV  240
LNSSEEKNSQ HVSSGDEKEA EMLGPCRGLE FDCEMLLFDD IIQNELLCVE GALNWGREDD  300
VSLAIFEGEK KTTERNEDQC EQLAENGNLN SHDEFYRCSS IGSLFDDWSW ENLMPWDENV  360
DNTISCLWQG DHGEGDDQNA FVARLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.15e-73MYB family protein