PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668806.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 766aa MW: 87437 Da PI: 6.8894

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.5	1.4e-20	69	162	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + it+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w++t +++ HnHel XP_021668806.1 69 EFYCSFAKQCGFSIRRHRTRGKdGVGRGITRRDFTCHRGGYPQIKASDEGKMQRNRKSSRCGCQAYMRIVKKAdfdVPEWRITGFSNIHNHELL 162 6*************999887455667****************9***************98877677789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
MQCHLSKLEI MSKLTDLVKE TSESGMDSCA DDIGNVEEMA EVTILSRQTS VNLVPFIGQR 60 FVSQDAAYEF YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QIKASDEGKM 120 QRNRKSSRCG CQAYMRIVKK ADFDVPEWRI TGFSNIHNHE LLKSNEVQLL PACCTMSADD 180 KSRICMYAKA GMSVRQMLRM MELEKGVKLG CLPFTEMDVR NLLQSFRNVN RDSDAINLLE 240 MCKYRKDKDP NFKYNFQIDP NNQLERIAWS YASSIESYEA FGDAVIFDTT HRLDPYDMIM 300 GIWVGVDNHG SNCFFGCVLL RDENTESFSW ALKTFLESMD GKAPETILTD QNIWLKEAVA 360 VEMPRTKHAF CIWHIIAKFS DWFSVLLGSQ YDKWKAEFHR LYNLHSVEDF EVGWMKMVDT 420 YGLHGNKHIA SLYALRAFWA LPFLRCHFFA GMTSTFQSDL INAFIQRILS AHSLDNFVEK 480 VAVAVGYKVD AGPKQKVQRK AHKVSLKMGS PIESHAATVL TPYAFSKLQE ELVLAPQYAS 540 LFVDETYFIV RHHIDMDIGC KVLWIPHDEF ISCSCHLFEF SGILCRHVLR VLSTNNCFHI 600 PDRYLPVRWR EVNTSLTKPF QAFSSDERAG KVQLLQSMVS TLITESIDTE ERLNVACNQV 660 ARVLSRIKEF PGPAHDDNDV AYTSPSDSLI LPEVEDSVGF VQSFAAGNTH DPMTLEKMKE 720 RIRDGINIYR KRRRCSLPCC GQFGHDANDC PMMGSDDLNE DGLGFI

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

MQCHLSKLEI MSKLTDLVKE TSESGMDSCA DDIGNVEEMA EVTILSRQTS VNLVPFIGQR  60
FVSQDAAYEF YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QIKASDEGKM  120
QRNRKSSRCG CQAYMRIVKK ADFDVPEWRI TGFSNIHNHE LLKSNEVQLL PACCTMSADD  180
KSRICMYAKA GMSVRQMLRM MELEKGVKLG CLPFTEMDVR NLLQSFRNVN RDSDAINLLE  240
MCKYRKDKDP NFKYNFQIDP NNQLERIAWS YASSIESYEA FGDAVIFDTT HRLDPYDMIM  300
GIWVGVDNHG SNCFFGCVLL RDENTESFSW ALKTFLESMD GKAPETILTD QNIWLKEAVA  360
VEMPRTKHAF CIWHIIAKFS DWFSVLLGSQ YDKWKAEFHR LYNLHSVEDF EVGWMKMVDT  420
YGLHGNKHIA SLYALRAFWA LPFLRCHFFA GMTSTFQSDL INAFIQRILS AHSLDNFVEK  480
VAVAVGYKVD AGPKQKVQRK AHKVSLKMGS PIESHAATVL TPYAFSKLQE ELVLAPQYAS  540
LFVDETYFIV RHHIDMDIGC KVLWIPHDEF ISCSCHLFEF SGILCRHVLR VLSTNNCFHI  600
PDRYLPVRWR EVNTSLTKPF QAFSSDERAG KVQLLQSMVS TLITESIDTE ERLNVACNQV  660
ARVLSRIKEF PGPAHDDNDV AYTSPSDSLI LPEVEDSVGF VQSFAAGNTH DPMTLEKMKE  720
RIRDGINIYR KRRRCSLPCC GQFGHDANDC PMMGSDDLNE DGLGFI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	730	734	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein