PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668428.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 348aa MW: 38724.7 Da PI: 7.2214

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.6	6.7e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G +W++ ++ g++R++k+c++rw +yl XP_021668428.1 14 KGPWTPEEDQKLVKYIQKHGHSSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.9	2.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l XP_021668428.1 67 RGKFSQEEEQTILNLHSVLGNK-WSAIASHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MGRSPCYDES GLKKGPWTPE EDQKLVKYIQ KHGHSSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQEEEQTILN LHSVLGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHRPRT DILSTLPHLI AQANLKELID HRSVEEHAMR LQAEAVQMAK FQYLQYLLQP 180 QSHHPPASVV TGSNYIATTS AFSNMETFNL LNSLASIKDS LVSGSITQLD LSSTTSPPGL 240 SDSIPFSHLP DLQIPCSYQT PLNKDMLIDQ ANNPEFTVFS QGENSPWLPS SSSTPSPPSV 300 APPLLTQTNS SINTTMGDAS STNSSFGGEA TTVWQHLLLD DPLFHEIA

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MGRSPCYDES GLKKGPWTPE EDQKLVKYIQ KHGHSSWRAL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF SQEEEQTILN LHSVLGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG  120
FDPMTHRPRT DILSTLPHLI AQANLKELID HRSVEEHAMR LQAEAVQMAK FQYLQYLLQP  180
QSHHPPASVV TGSNYIATTS AFSNMETFNL LNSLASIKDS LVSGSITQLD LSSTTSPPGL  240
SDSIPFSHLP DLQIPCSYQT PLNKDMLIDQ ANNPEFTVFS QGENSPWLPS SSSTPSPPSV  300
APPLLTQTNS SINTTMGDAS STNSSFGGEA TTVWQHLLLD DPLFHEIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10280.1	1e-103	MYB family protein