PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668275.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 475aa MW: 53336.4 Da PI: 7.1945

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668275.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.8	1.9e-13	305	350	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+r+N++f Lr+++P+ K++Ka+ L Av YIk+L XP_021668275.1 305 NHVEAERQRRERLNHRFYALRSVVPNV-----SKMDKASLLADAVTYIKEL 350 799*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MKKISMEEIA SPSSSSSFMS FCQDSSPPLQ QRLQFILQSR PEWWVYAIFW QASKDATGRL 60 VLSWGDGHFR GTKEFAAKAC NKQNQPKFGF NLERKMINKE SQTLFTDDMD MDRLADVDVI 120 DYEWFYTVSV TRSFAIDDGI LGRTFGSGAF IWLTGNNELQ MYDCERVKEA RMHGIQTLVC 180 ISTSCAVVEL GSSNTIDKDW SLVQLCKSLF GGDTACLVSK EPSHESQLQI PNTSFLDIGM 240 FSASQKDTSA EKQNEGDKKK DPTGQGRSSS DSARSDSEGN FAAGNTDRLK KRGRTQLNGK 300 ELTLNHVEAE RQRRERLNHR FYALRSVVPN VSKMDKASLL ADAVTYIKEL KAKVDELESK 360 LQAVSKKSKI TSVTDNQSTD SMIDHIRSSS AYKAKAMELE VKIVGSEAMI RFLSPDVNYP 420 AARLMDALRE VEFKVHHASM SSIKEMVLQD VVARVPDGLT NEELVRSAIL QRMQN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MKKISMEEIA SPSSSSSFMS FCQDSSPPLQ QRLQFILQSR PEWWVYAIFW QASKDATGRL  60
VLSWGDGHFR GTKEFAAKAC NKQNQPKFGF NLERKMINKE SQTLFTDDMD MDRLADVDVI  120
DYEWFYTVSV TRSFAIDDGI LGRTFGSGAF IWLTGNNELQ MYDCERVKEA RMHGIQTLVC  180
ISTSCAVVEL GSSNTIDKDW SLVQLCKSLF GGDTACLVSK EPSHESQLQI PNTSFLDIGM  240
FSASQKDTSA EKQNEGDKKK DPTGQGRSSS DSARSDSEGN FAAGNTDRLK KRGRTQLNGK  300
ELTLNHVEAE RQRRERLNHR FYALRSVVPN VSKMDKASLL ADAVTYIKEL KAKVDELESK  360
LQAVSKKSKI TSVTDNQSTD SMIDHIRSSS AYKAKAMELE VKIVGSEAMI RFLSPDVNYP  420
AARLMDALRE VEFKVHHASM SSIKEMVLQD VVARVPDGLT NEELVRSAIL QRMQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	287	292	DRLKKR
2	289	295	LKKRGRT
3	311	316	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	6e-66	bHLH family protein