PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667940.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 497aa MW: 52093.6 Da PI: 8.4885

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	67	89	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_021667940.1 67 FVCEICNKGFQRDQNLQLHRRGH 89 89*******************88 PP
2	zf-C2H2	15.8	4.1e-05	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++t+ XP_021667940.1 143 WKCERCSKKYAVQSDWKAHMKTC 165 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MVEVENSSQM TISTASGEAT SVSSFGNQAA PLSVPPPKKK RNLPGMPDPD AEVVALSPET 60 LLATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRTS KEPRKRVYVC PEPTCVHHNP 120 TRALGDLTGI KKHFCRKHGE KKWKCERCSK KYAVQSDWKA HMKTCGTREY KCDCGTLFSR 180 RDSFITHRAF CDALAEESAR AQTVTTMGKE GNTNVKSVVA SPPPPPLTPS TTVVSPGLSV 240 QSSELAENPV GLSAATPATT CLTATVTSTS STSNVFASVF ASSTAAAISQ AASHASSASF 300 SNLLCALTSA DCATTIPTPR AIEPPSLSLS SSLYLCNDAS SLFADQEHRH YTQSPQPAMS 360 ATALLQKAAQ MGATSSNSSF LRGLGLPVSS SSGRDINGNQ WDVKPDNNAV AAGLGLGLPS 420 GDVMIGSSHL FGNKPTTLDL LGLGIGTGSA LLNPYGGSFN VGAAAAAAAA AAPYGGGSSE 480 ETWEVAPEKK PNGSASH

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MVEVENSSQM TISTASGEAT SVSSFGNQAA PLSVPPPKKK RNLPGMPDPD AEVVALSPET  60
LLATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRTS KEPRKRVYVC PEPTCVHHNP  120
TRALGDLTGI KKHFCRKHGE KKWKCERCSK KYAVQSDWKA HMKTCGTREY KCDCGTLFSR  180
RDSFITHRAF CDALAEESAR AQTVTTMGKE GNTNVKSVVA SPPPPPLTPS TTVVSPGLSV  240
QSSELAENPV GLSAATPATT CLTATVTSTS STSNVFASVF ASSTAAAISQ AASHASSASF  300
SNLLCALTSA DCATTIPTPR AIEPPSLSLS SSLYLCNDAS SLFADQEHRH YTQSPQPAMS  360
ATALLQKAAQ MGATSSNSSF LRGLGLPVSS SSGRDINGNQ WDVKPDNNAV AAGLGLGLPS  420
GDVMIGSSHL FGNKPTTLDL LGLGIGTGSA LLNPYGGSFN VGAAAAAAAA AAPYGGGSSE  480
ETWEVAPEKK PNGSASH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-116	C2H2 family protein