PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667477.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARR-B

Protein Properties

Length: 391aa MW: 44737.7 Da PI: 6.648

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667477.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	71.5	1.3e-22	200	253	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH+rFv+av+q+ G +k k+il+lm+v+ Lt+e+v+SHLQkYR+ XP_021667477.1 200 KARVVWSVDLHQRFVKAVNQI-GFDKVGQKEILDLMNVPWLTRENVASHLQKYRI 253 68*****************.9*****************************7 PP
2	Myb_DNA-binding	32.5	1.9e-10	202	252	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + k I m+ +t++++ s++qky+ XP_021667477.1 202 RVVWSVDLHQRFVKAVNQIGFDkvGQKEILDLMNvPWLTRENVASHLQKYR 252 678*******************99**********************7 PP
3	Response_reg	82.5	1.3e-27	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev++++ +++al+l++e++ +D+++ D++mp+mdG+++l++ e +lp+i+++ + ++ + ++l+ G XP_021667477.1 20 VLVVDDDPIWLKILEKMLKKCSY-EVTTCALARDALHLFRERKdgYDIVISDVNMPDMDGFKFLEHVGLEM-DLPVIMMSVDAGSSRVMKCLQHG 112 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ + el++ XP_021667477.1 113 ACDYLLKPIRIIELRN 128 **********9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MMDNGFSSLR NDAFPAGLRV LVVDDDPIWL KILEKMLKKC SYEVTTCALA RDALHLFRER 60 KDGYDIVISD VNMPDMDGFK FLEHVGLEMD LPVIMMSVDA GSSRVMKCLQ HGACDYLLKP 120 IRIIELRNIW KHVSRKKINE VRDIEILEGM ETIQTTRNGL DQPDYGHLVC GEDLTSVKKR 180 KDIEGKHDDK DPCDNSSTKK ARVVWSVDLH QRFVKAVNQI GFDKVGQKEI LDLMNVPWLT 240 RENVASHLQK YRIYLSRLQK QMDLEIAFNW INDSDSHSRS ATSVGTQYSC NMWHKGVSNG 300 SYGFSGNSSP LHYLEPRLYG RSYVSDEEGT VSKPVIASKR SLTTDDSDTW KSRRSQTEFS 360 YSSPSWESEV NSAAFDSTFL FIPSRDDEKK H

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MMDNGFSSLR NDAFPAGLRV LVVDDDPIWL KILEKMLKKC SYEVTTCALA RDALHLFRER  60
KDGYDIVISD VNMPDMDGFK FLEHVGLEMD LPVIMMSVDA GSSRVMKCLQ HGACDYLLKP  120
IRIIELRNIW KHVSRKKINE VRDIEILEGM ETIQTTRNGL DQPDYGHLVC GEDLTSVKKR  180
KDIEGKHDDK DPCDNSSTKK ARVVWSVDLH QRFVKAVNQI GFDKVGQKEI LDLMNVPWLT  240
RENVASHLQK YRIYLSRLQK QMDLEIAFNW INDSDSHSRS ATSVGTQYSC NMWHKGVSNG  300
SYGFSGNSSP LHYLEPRLYG RSYVSDEEGT VSKPVIASKR SLTTDDSDTW KSRRSQTEFS  360
YSSPSWESEV NSAAFDSTFL FIPSRDDEKK H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-113	ARR-B family protein