PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667227.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 388aa MW: 44279.8 Da PI: 6.5982

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59	8.2e-19	167	261	3	95
EE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 k+l++sdv+++gr+vlpk+ aee+ + +e+++++++d s++ W++k+++ ++ks++yvl+ ++ +Fvk+ngL+ gD+++++ +++++ XP_021667227.1 167 KELKNSDVGSLGRIVLPKREAEENlpilS--DKEGIQVVIRDvNSNKDWSLKFKFwcNNKSRMYVLE-NTGDFVKQNGLEIGDSLTLY--EDECK 256 899*********************643..447899*7788***98888999999999.******************..56888 PP ..EEE CS B3 91 elvvk 95 +l+++ XP_021667227.1 257 NLYFS 261 88776 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MGCSQNSPLS SICGPLNHPS TSSNSSIESY HCPAEYHMLP PFQSLQFPQA YPLEHAGQYS 60 PSAYPLYPFW IWQNGIEIHK SCFLQPNGLS IGQARRVLDA YKTKVARSKR KLARQRSPGK 120 NFPSGANSSQ MDIRRPSFVE DSQSTINRDL YKFCTSDNKR LRALLSKELK NSDVGSLGRI 180 VLPKREAEEN LPILSDKEGI QVVIRDVNSN KDWSLKFKFW CNNKSRMYVL ENTGDFVKQN 240 GLEIGDSLTL YEDECKNLYF SFKKLETPQI LPSYKQRSTN YLYIPHMYQD RDEEEASLAL 300 LIEQLNHKEQ QESNSLVTLS MDISSSYRHK EEERNGPFNN ETSISINPEP APAAMQPTSM 360 QVVDDHYIDD CYTGLGVLPD VNIYNFSL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MGCSQNSPLS SICGPLNHPS TSSNSSIESY HCPAEYHMLP PFQSLQFPQA YPLEHAGQYS  60
PSAYPLYPFW IWQNGIEIHK SCFLQPNGLS IGQARRVLDA YKTKVARSKR KLARQRSPGK  120
NFPSGANSSQ MDIRRPSFVE DSQSTINRDL YKFCTSDNKR LRALLSKELK NSDVGSLGRI  180
VLPKREAEEN LPILSDKEGI QVVIRDVNSN KDWSLKFKFW CNNKSRMYVL ENTGDFVKQN  240
GLEIGDSLTL YEDECKNLYF SFKKLETPQI LPSYKQRSTN YLYIPHMYQD RDEEEASLAL  300
LIEQLNHKEQ QESNSLVTLS MDISSSYRHK EEERNGPFNN ETSISINPEP APAAMQPTSM  360
QVVDDHYIDD CYTGLGVLPD VNIYNFSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	1e-62	B3 family protein