PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021667119.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YC | ||||||||
Protein Properties | Length: 255aa MW: 28255.8 Da PI: 5.9359 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 176.3 | 3e-55 | 76 | 179 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+atdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+ enkrrtl+k+diaaa+trt+ifdfl XP_021667119.1 76 QLQTFWTNQyqeIEQATDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTGENKRRTLQKNDIAAAITRTEIFDFL 170 89******99999********************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_021667119.1 171 VDIVPREDL 179 ******987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MDQRGHAQAS AAGEVGSTAP VPYGISSYQP KQMMGPAASG SLQSAAQPSG VAASQAQHQL 60 AYQHIHQQQQ EQLQQQLQTF WTNQYQEIEQ ATDFKNHSLP LARIKKIMKA DEDVRMISAE 120 APVIFARACE MFILELTLRS WNHTGENKRR TLQKNDIAAA ITRTEIFDFL VDIVPREDLK 180 DEVLASVPRG SLPVGGPAEA IPYYYMSPQF APQVAAPGMS VGQPVVDQNL YGQQTRPYVT 240 QPIWPQQQQQ PPSDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 155 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 3e-78 | NF-YC family protein |