PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667092.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 1042aa MW: 115159 Da PI: 4.8122

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.6e-18	37	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_021667092.1 37 KGQWTAEEDEILCKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799**************************9.**********986 PP
2	Myb_DNA-binding	63.8	3.3e-20	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde++++ v+++G++ W+tIa++++ gR +kqc++rw+++l XP_021667092.1 89 KGPWSKEEDEIIIEMVNKYGPKKWSTIAHHLP-GRIGKQCRERWHNHL 135 79****************************.***********97 PP
3	Myb_DNA-binding	46.4	8.8e-15	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT++E++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_021667092.1 141 KEAWTQQEELALIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 183 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1042 aa Download sequence
MESDKSISAP SDGHSEGVQR IRPLHGRTSG PARRSTKGQW TAEEDEILCK AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII IEMVNKYGPK KWSTIAHHLP 120 GRIGKQCRER WHNHLNPSIN KEAWTQQEEL ALIRAHQIYG NRWAELTKFL PGRTDNAIKN 180 HWNSSVKKKL DSYLASGLLE QFQGLPFVAH KNQPMPSSSS WVQSSGDDTG PKCGTETEEI 240 SECSQESIVA GCSQTASGLG NAVLHTREEF QLAEEAGLGK EHSSSPVSCS EQYFMSVADV 300 TFSIPEIPCE VGCPSNFLQQ NFSQNPITSA SSDYQFDLQE FRNISSLELG QESSGLSTHC 360 IAANESHELV NVSFQTSMGN ITASSAKPDH ILISDDECCR FLFSDAMNGG IFSSGNFTKG 420 PNSVECIDTL NCQSSNYQIS ETDKTSQSFS PSKSGVFTTS CSQPFPSGPS LLSADDSNPV 480 CRREPNQLID HSFAAHEQEF IRSAHDDFIY TNGTGSSPYG DGTDSTDLPE QNYLKEPSKL 540 VSVDTFTSGS DTMQSCPVDE MPNVQTEQQD AGALCYEPPR FPSLDVPFLS CDLIQSGSDM 600 QQEYSPLGIR QLMMSSMNCI TPFRLWESPS RDDSPDAVLK SAARTFSGTP SILKKRNRDL 660 LSPLSDRRVD KKLEIDMTSS LTKEFSRLDV MFDESETHTA SRLSPSNQKR NHGSTYEDKE 720 NLDPAFEGRE EKGRDCPAFV DKKISEKDCD SSNSQDNKEQ GTSDADAKNK VHTNASTLNV 780 EQPSGVLVED SMNDLLLFSP DQVGFQGDKA FAPSSRTPKN LYRRILGTLS EKCIASESSS 840 GNSCIVVRSP TICKKNNENL LLASTSARSE NTIDNTENDA GAENLSIFGE TPFKRSIESP 900 SAWKSPWFIN SFLPGPRVDT DISIEDIGYF LSPGERSYDA IALMKQLSEQ TASAYADALE 960 VLGNETHETI LEKRHSNMNL ENNDAPNNQL ENRSRLASNV STECRTLDFS ECEAPGKGTE 1020 RGISSTAMTF SSPSSYLLKG CR

Sequence ? help Back to Top

Protein Sequence Length: 1042 aa Download sequence

MESDKSISAP SDGHSEGVQR IRPLHGRTSG PARRSTKGQW TAEEDEILCK AVQRFKGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII IEMVNKYGPK KWSTIAHHLP  120
GRIGKQCRER WHNHLNPSIN KEAWTQQEEL ALIRAHQIYG NRWAELTKFL PGRTDNAIKN  180
HWNSSVKKKL DSYLASGLLE QFQGLPFVAH KNQPMPSSSS WVQSSGDDTG PKCGTETEEI  240
SECSQESIVA GCSQTASGLG NAVLHTREEF QLAEEAGLGK EHSSSPVSCS EQYFMSVADV  300
TFSIPEIPCE VGCPSNFLQQ NFSQNPITSA SSDYQFDLQE FRNISSLELG QESSGLSTHC  360
IAANESHELV NVSFQTSMGN ITASSAKPDH ILISDDECCR FLFSDAMNGG IFSSGNFTKG  420
PNSVECIDTL NCQSSNYQIS ETDKTSQSFS PSKSGVFTTS CSQPFPSGPS LLSADDSNPV  480
CRREPNQLID HSFAAHEQEF IRSAHDDFIY TNGTGSSPYG DGTDSTDLPE QNYLKEPSKL  540
VSVDTFTSGS DTMQSCPVDE MPNVQTEQQD AGALCYEPPR FPSLDVPFLS CDLIQSGSDM  600
QQEYSPLGIR QLMMSSMNCI TPFRLWESPS RDDSPDAVLK SAARTFSGTP SILKKRNRDL  660
LSPLSDRRVD KKLEIDMTSS LTKEFSRLDV MFDESETHTA SRLSPSNQKR NHGSTYEDKE  720
NLDPAFEGRE EKGRDCPAFV DKKISEKDCD SSNSQDNKEQ GTSDADAKNK VHTNASTLNV  780
EQPSGVLVED SMNDLLLFSP DQVGFQGDKA FAPSSRTPKN LYRRILGTLS EKCIASESSS  840
GNSCIVVRSP TICKKNNENL LLASTSARSE NTIDNTENDA GAENLSIFGE TPFKRSIESP  900
SAWKSPWFIN SFLPGPRVDT DISIEDIGYF LSPGERSYDA IALMKQLSEQ TASAYADALE  960
VLGNETHETI LEKRHSNMNL ENNDAPNNQL ENRSRLASNV STECRTLDFS ECEAPGKGTE  1020
RGISSTAMTF SSPSSYLLKG CR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein