PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666755.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 499aa MW: 55801.8 Da PI: 8.2831

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.6	7.7e-20	53	99	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++d+v+++G+ W+ Ia+ ++ gR +kqc++rw+++l XP_021666755.1 53 KGPWTQEEDDKIIDLVAKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 99 79****************************.***********97 PP
2	Myb_DNA-binding	53.2	7e-17	106	148	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+WT eE++ l +a++ +G++ W+ Ia+ + gRt++++k++w++ XP_021666755.1 106 GAWTLEEELALMNAHRIHGNK-WAEIAKVLS-GRTDNSIKNHWNS 148 79*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MQLNLVEHSV NKYFRNRFAL ENDAMIQAEF FPDRSEVQCL HRWQKVLNPD LVKGPWTQEE 60 DDKIIDLVAK YGPTKWSVIA KSLPGRIGKQ CRERWHNHLN PDIKNGAWTL EEELALMNAH 120 RIHGNKWAEI AKVLSGRTDN SIKNHWNSSL KKKLDFYLAT GKLPAVVKSD IVFSPRKLPS 180 VAKTGIRSGS EDTNKPTVTK MSKDSDSTAQ TLSGTTDACK LEENGKDELE SLALVRDMAA 240 SSSVFPNEST DSEGVECKQH SFVTYYSCCD SKSLRKCENY GINYEISEEK VIGSQLQFQT 300 STYGSLYYEP PRLETFTPID MDPLVMHQVQ HEYSSSPISS PGSSFTPPCV KSSCLSTQSP 360 ESILRIAAKS YQNTPSIFRK RKTGSQVHLL PSKIGKVGQE SVEDRLQRRI ENTSEKAGSQ 420 EGNVCNSPRP DNSTSLSNGK AFNASPPYRL KSKRTAVFKS VERQLEFTFD KEKCESTNSV 480 NGSSLISEDC SLATKIGVT

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MQLNLVEHSV NKYFRNRFAL ENDAMIQAEF FPDRSEVQCL HRWQKVLNPD LVKGPWTQEE  60
DDKIIDLVAK YGPTKWSVIA KSLPGRIGKQ CRERWHNHLN PDIKNGAWTL EEELALMNAH  120
RIHGNKWAEI AKVLSGRTDN SIKNHWNSSL KKKLDFYLAT GKLPAVVKSD IVFSPRKLPS  180
VAKTGIRSGS EDTNKPTVTK MSKDSDSTAQ TLSGTTDACK LEENGKDELE SLALVRDMAA  240
SSSVFPNEST DSEGVECKQH SFVTYYSCCD SKSLRKCENY GINYEISEEK VIGSQLQFQT  300
STYGSLYYEP PRLETFTPID MDPLVMHQVQ HEYSSSPISS PGSSFTPPCV KSSCLSTQSP  360
ESILRIAAKS YQNTPSIFRK RKTGSQVHLL PSKIGKVGQE SVEDRLQRRI ENTSEKAGSQ  420
EGNVCNSPRP DNSTSLSNGK AFNASPPYRL KSKRTAVFKS VERQLEFTFD KEKCESTNSV  480
NGSSLISEDC SLATKIGVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-123	MYB family protein