PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666754.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 557aa MW: 61589.4 Da PI: 8.5584

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEde l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l XP_021666754.1 59 KGGWTLEEDETLRNAVAAFKGKSWKKIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	62.4	8.9e-20	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++d+v+++G+ W+ Ia+ ++ gR +kqc++rw+++l XP_021666754.1 111 KGPWTQEEDDKIIDLVAKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	53	8.1e-17	164	206	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+WT eE++ l +a++ +G++ W+ Ia+ + gRt++++k++w++ XP_021666754.1 164 GAWTLEEELALMNAHRIHGNK-WAEIAKVLS-GRTDNSIKNHWNS 206 79*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MGEVKLEECC LENKQLAAAS CSSISEGSVS TILKSPGVPS PATASPIHRR TTGPIRRAKG 60 GWTLEEDETL RNAVAAFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD 120 KIIDLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKNGAWTLEE ELALMNAHRI 180 HGNKWAEIAK VLSGRTDNSI KNHWNSSLKK KLDFYLATGK LPAVVKSDIV FSPRKLPSVA 240 KTGIRSGSED TNKPTVTKMS KDSDSTAQTL SGTTDACKLE ENGKDELESL ALVRDMAASS 300 SVFPNESTDS EGVECKQHSF VTYYSCCDSK SLRKCENYGI NYEISEEKVI GSQLQFQTST 360 YGSLYYEPPR LETFTPIDMD PLVMHQVQHE YSSSPISSPG SSFTPPCVKS SCLSTQSPES 420 ILRIAAKSYQ NTPSIFRKRK TGSQVHLLPS KIGKVGQESV EDRLQRRIEN TSEKAGSQEG 480 NVCNSPRPDN STSLSNGKAF NASPPYRLKS KRTAVFKSVE RQLEFTFDKE KCESTNSVNG 540 SSLISEDCSL ATKIGVT

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MGEVKLEECC LENKQLAAAS CSSISEGSVS TILKSPGVPS PATASPIHRR TTGPIRRAKG  60
GWTLEEDETL RNAVAAFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD  120
KIIDLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKNGAWTLEE ELALMNAHRI  180
HGNKWAEIAK VLSGRTDNSI KNHWNSSLKK KLDFYLATGK LPAVVKSDIV FSPRKLPSVA  240
KTGIRSGSED TNKPTVTKMS KDSDSTAQTL SGTTDACKLE ENGKDELESL ALVRDMAASS  300
SVFPNESTDS EGVECKQHSF VTYYSCCDSK SLRKCENYGI NYEISEEKVI GSQLQFQTST  360
YGSLYYEPPR LETFTPIDMD PLVMHQVQHE YSSSPISSPG SSFTPPCVKS SCLSTQSPES  420
ILRIAAKSYQ NTPSIFRKRK TGSQVHLLPS KIGKVGQESV EDRLQRRIEN TSEKAGSQEG  480
NVCNSPRPDN STSLSNGKAF NASPPYRLKS KRTAVFKSVE RQLEFTFDKE KCESTNSVNG  540
SSLISEDCSL ATKIGVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-164	MYB family protein