PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021666730.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 728aa    MW: 79515.1 Da    PI: 6.398
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021666730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS322.87e-993727275374
            GRAS   5 LlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                     + ++Ae +++g+  laq +Larl+++ + + g+p  R+a+yf+eAL+  l+       ++ +ps+ s  + ++++ a+k fse+sPil+f+++t+
  XP_021666730.1 372 ICQAAELIETGNPVLAQGILARLNHQlSLSIGKPHIRAAFYFKEALQLLLHM-----NNSTNPSTMSACSLISKIGAYKSFSEISPILQFANFTC 461
                     689**********************9455667****************9997.....7888999999999************************* PP

            GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele. 192
                     Nqa+lea eg +r+HiiDfdi+ G+QW++L+q+La R++g psl+iT+++sp+s+++ el  t+e+L+ fA+e+++pfe ++l +++l++ + + 
  XP_021666730.1 462 NQALLEACEGFDRIHIIDFDIGFGGQWASLMQELAMRNGGVPSLKITAFASPSSHDEVELGFTRENLRIFASEINMPFELEILGHESLNSGSWSl 556
                     **********************************************************************************9888887775542 PP

            GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                      L v+++E++aVnl +  ++ +  ++sl+      L+lvk+lsPkvvv  ++ +d+++  F++++ ++++ ys+l++slea    + ++ +k+Er
  XP_021666730.1 557 PLCVSEKEVIAVNLPIGPFSNY--PLSLPV----ALRLVKQLSPKVVVSLDRGCDRTDLAFAHHVNHSIQSYSSLLESLEAV-NMNLDALQKIER 644
                     578999**********888777..788877....*********************************************776.4567999***** PP

            GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +l+++ i++ v  ++++      +   Wr+ + ++GF+p ++s++a++qa++l+++++++g++ve+++ slvl+W++++L+s+SaWr
  XP_021666730.1 645 FLVQPGIEKTVLGRHRH----PDRTPPWRSLFLQSGFTPFQFSNFAESQAECLVQRTPVRGFHVEKRQSSLVLCWQRKELISASAWR 727
                     ************99998....88999************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
MKAMPLPFED FQGKGVLGFS SCSSSSSSSS SSYPDSFSHL PPQNQLQQPQ KWQNSNTQEN  60
CCYVGSEPTS VLDARRSPSP PTSSSTLSSS QGGSNGGGGG ASTETTTGVA AAVSGYPSVD  120
VSTEKCGQLG MEDWEGVLPG SPSHEQSILR LIMGDVEDPS LGLNRLLQGG SGSQDMEFNA  180
GFGVVDQGFF FEPIHSTTLV NSIQPSVHGT SSEFPLLSQN ARIGSVLSQN PNPVISTSAG  240
NILPGMFQHQ PPPPIEAAEE KPQIFNPQVI THQHQAQFGQ NPAMFMPLSY AQLQEHHLLS  300
PPPTKRLNSG PIGANCPLPK VPFPDSRPEL FLQRQQHHLQ ILQQQRPAMM KQKIVTDELA  360
AQQLQQAILN PICQAAELIE TGNPVLAQGI LARLNHQLSL SIGKPHIRAA FYFKEALQLL  420
LHMNNSTNPS TMSACSLISK IGAYKSFSEI SPILQFANFT CNQALLEACE GFDRIHIIDF  480
DIGFGGQWAS LMQELAMRNG GVPSLKITAF ASPSSHDEVE LGFTRENLRI FASEINMPFE  540
LEILGHESLN SGSWSLPLCV SEKEVIAVNL PIGPFSNYPL SLPVALRLVK QLSPKVVVSL  600
DRGCDRTDLA FAHHVNHSIQ SYSSLLESLE AVNMNLDALQ KIERFLVQPG IEKTVLGRHR  660
HPDRTPPWRS LFLQSGFTPF QFSNFAESQA ECLVQRTPVR GFHVEKRQSS LVLCWQRKEL  720
ISASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-128GRAS family protein