PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666443.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 374aa MW: 42991.8 Da PI: 9.9976

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.6e-14	169	220	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ XP_021666443.1 169 QRMTHIAVERNRRKQMNEYLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 220 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MIREFNANSD YNIKSACLAM IQPQTLTSFE FVAGVWMGLA PLKVEVFSWL TLLGRVSTRD 60 LLLNRVWLLQ MVKFELVYTE RFKAITFPLG RLGIRLFTKD SLETSLLWES SSRSQDHGRA 120 LSSCSLMTRQ RRSREPESVD WKQNLAVQGR KKRRRKPRVC KNKEEAETQR MTHIAVERNR 180 RKQMNEYLAV LRSLMPESYV QRGDQASIVG GAIEFVKELE HLLHSLEAQK VQLLHGLKGP 240 SEDTSISTGT SKSQFPPPFA QFFVYPQYTC SQMPNKYTSK AKASIADIEV TLIETHANLR 300 ILSRKRPRQL FKFVTGFQTL YLTILHINVT TMDPLVLYSI SAKLEEECQL TSVDDIAGAV 360 HHMLRKIEEE TTLF

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MIREFNANSD YNIKSACLAM IQPQTLTSFE FVAGVWMGLA PLKVEVFSWL TLLGRVSTRD  60
LLLNRVWLLQ MVKFELVYTE RFKAITFPLG RLGIRLFTKD SLETSLLWES SSRSQDHGRA  120
LSSCSLMTRQ RRSREPESVD WKQNLAVQGR KKRRRKPRVC KNKEEAETQR MTHIAVERNR  180
RKQMNEYLAV LRSLMPESYV QRGDQASIVG GAIEFVKELE HLLHSLEAQK VQLLHGLKGP  240
SEDTSISTGT SKSQFPPPFA QFFVYPQYTC SQMPNKYTSK AKASIADIEV TLIETHANLR  300
ILSRKRPRQL FKFVTGFQTL YLTILHINVT TMDPLVLYSI SAKLEEECQL TSVDDIAGAV  360
HHMLRKIEEE TTLF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	156	RKKRRRK
2	150	157	RKKRRRKP
3	151	156	KKRRRK
4	170	181	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-76	bHLH family protein