PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021666223.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family RAV
Protein Properties Length: 333aa    MW: 39201.4 Da    PI: 9.9141
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021666223.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.11.4e-104288153
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                    ++++GV   + +g+W A+I        +k ++lg+++ +eeAa a+++a  kl
  XP_021666223.1 42 PKFRGVILLR-SGKWGAQIAFK-----YKAYWLGTHDMEEEAAMAYDRAVIKL 88
                    6899997666.8******9993.....5*********************9987 PP
2B365.11.1e-20161258186
                     EEEE-..-HHHHTT-EE--HHH.HTT..............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                     f k+lt+ dv + + + +pk++a e+              +g+  +s++lt+ d++   W+++++y+k+ +++v+tkGW++F k n+Lk +D+v 
  XP_021666223.1 161 FRKELTQTDVVRMKGFHIPKDYAMEYfpplagvnssggyeNGN--KSIELTFFDRHCHPWTFRYSYWKSTRTFVFTKGWRHFLKMNNLKPKDSVF 253
                     889***************************9999998764434..899*********************************************** PP

                     EEE-S CS
              B3  82 Fkldg 86 
                     F++ +
  XP_021666223.1 254 FYRCE 258
                     **543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEVGTNSDSR VSTTMESSNL NIINMNQQST EHCSSRARGS SPKFRGVILL RSGKWGAQIA  60
FKYKAYWLGT HDMEEEAAMA YDRAVIKLQR SDAPLNFPMT NYTVQETKFQ RRYSNEDILY  120
MIKDKTYLSK FTNYLANQSL LRKYAASNLA NQQGISYQML FRKELTQTDV VRMKGFHIPK  180
DYAMEYFPPL AGVNSSGGYE NGNKSIELTF FDRHCHPWTF RYSYWKSTRT FVFTKGWRHF  240
LKMNNLKPKD SVFFYRCEHQ RENQGRLFYM IDAQRSSMES NVVIRNVDKE TDARKRANKE  300
VDSEDIEEKE TDNVAKLFGF QIIKRRPNYK LFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.11e-55RAV family protein