PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021665420.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 390aa MW: 43389.1 Da PI: 7.7916

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021665420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	90.3	4.3e-28	53	136	3	70
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssa 70 g+kdrhsk++T +g+RdRR+Rls+++a+++++Lqd+LG+ ++sk i+WLl + k i++l+ + s +++ XP_021665420.1 53 GGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYELQDRLGLTQPSKVIDWLLDATKNDIDKLPPLvmphgfgqfhphqmllSHEPN 136 79*************************************************************777777644444444422222 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MTTRSSREKG FQAKQEGDAA YDNKLAKAVP STSSRQWSAF RNPRIVRVSR SFGGKDRHSK 60 VCTVRGLRDR RIRLSVPTAI QLYELQDRLG LTQPSKVIDW LLDATKNDID KLPPLVMPHG 120 FGQFHPHQML LSHEPNSSLV PNLFDVNSAF NKDGGFYSLG ININSSLDGE DHQETVAKSK 180 YWEAAEASLR SGRSNEVERI AGKGKWIKTN EQENQDGFCN YIATEQVSAQ KFFPLTSSSH 240 SSLPGLPNNP LPFNPYYHWD ASNLSLSHQF PSHGFLPQTE SSLNGNNTGS LPSSSSLPFS 300 SASQFFFCPP ATMSSLFPQY PPYATTPLEN ESREINHVQL LSSGSQHILP SSRATSLPMK 360 NLSLNVNPWF GHSHQSSNAR QPDEEENPDS

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MTTRSSREKG FQAKQEGDAA YDNKLAKAVP STSSRQWSAF RNPRIVRVSR SFGGKDRHSK  60
VCTVRGLRDR RIRLSVPTAI QLYELQDRLG LTQPSKVIDW LLDATKNDID KLPPLVMPHG  120
FGQFHPHQML LSHEPNSSLV PNLFDVNSAF NKDGGFYSLG ININSSLDGE DHQETVAKSK  180
YWEAAEASLR SGRSNEVERI AGKGKWIKTN EQENQDGFCN YIATEQVSAQ KFFPLTSSSH  240
SSLPGLPNNP LPFNPYYHWD ASNLSLSHQF PSHGFLPQTE SSLNGNNTGS LPSSSSLPFS  300
SASQFFFCPP ATMSSLFPQY PPYATTPLEN ESREINHVQL LSSGSQHILP SSRATSLPMK  360
NLSLNVNPWF GHSHQSSNAR QPDEEENPDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-53	TCP family protein