PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021665255.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | TCP | ||||||||
Protein Properties | Length: 347aa MW: 38077.8 Da PI: 6.3756 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 115.7 | 6e-36 | 20 | 125 | 2 | 102 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssaseceaesss 79 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++ + XP_021665255.1 20 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELppwhpianntngtmeadQ------------- 101 79**************************************************************776555443322222110............. PP TCP 80 ssasnsssg...kaaksaakskksqk 102 ++ ss+ ++++s+ s + q+ XP_021665255.1 102 --NAGSSEMaiaEQSESSGYSFQLQR 125 ..111111122222222222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MKRAEGEIVQ VQGGHIVRST GRKDRHSKVY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD 60 RPSKAVDWLI KKAKSAIDKL AELPPWHPIA NNTNGTMEAD QNAGSSEMAI AEQSESSGYS 120 FQLQRQLADN PSNDSSFITP PIDPGAIPDT MKSLFPTSST ASSMNFQGYP PDIITRTTNH 180 TEDLGLSLHS FQDQDLIHGQ SQADTSHSPS NDQNLFAGSA PVGYEANFQR MMAWSNNTST 240 ENRTGGGFAF NPPQMPPQQA LLGQDSAFSQ RGPLQSSFAQ SIRAWNDLTM ASSDHHRTQE 300 IHQSFIFGSR FASEGLPGFS IPARIQGEEE QSVVSDRPSS SSPNSQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 4e-80 | TCP family protein |