PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021665221.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 234aa MW: 27457.4 Da PI: 7.917 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.8 | 5.2e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRr+g+lKK +ELSvLCda++ +iifsstgk+ y++ XP_021665221.1 9 KRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQYCT 59 79**********************************************986 PP | |||||||
2 | K-box | 72.7 | 1.1e-24 | 81 | 170 | 10 | 99 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e+ e+l ela L+ke++ Lq + R++ Ged++s+ ++eL +Leq+Le+s+ k+R++Knell +q+++l++ke++l+een ++ + ++ XP_021665221.1 81 EHDSREQLFSELAMLRKETRRLQLNMRRYTGEDMSSIPFEELSELEQELERSVAKVRDRKNELLQQQLDNLRRKERMLEEENGNMYRWIQ 170 4555778899************************************************************************99877665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGRGKIPIKR IENQTTRQVT FSKRRAGLLK KTHELSVLCD AQIGLIIFSS TGKMCQYCTE 60 PLRMEQIIER YQKITGTCIP EHDSREQLFS ELAMLRKETR RLQLNMRRYT GEDMSSIPFE 120 ELSELEQELE RSVAKVRDRK NELLQQQLDN LRRKERMLEE ENGNMYRWIQ EHRVALEYQQ 180 ATLEAKPMEH QQVLDQFPFC GEPSSVLQLA TIPSQIHHSY HLQLAQPSLQ GSNV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 1e-90 | MIKC_MADS family protein |