PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021664638.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 341aa MW: 38414.3 Da PI: 7.3939 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.6 | 3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ ++R++k+c++rw +yl XP_021664638.1 14 KGPWTAEEDQKLIDYIQKHGHGRWRTLPKNAELKRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.7 | 1.9e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_021664638.1 67 RGKFSIEEEEAIIQLHSILGNK-WSAIASRLP-GRTDNEIKNFWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MGKSACCDKN GLKKGPWTAE EDQKLIDYIQ KHGHGRWRTL PKNAELKRCG KSCRLRWTNY 60 LRPDIKRGKF SIEEEEAIIQ LHSILGNKWS AIASRLPGRT DNEIKNFWNT HIKKRLLRMG 120 IDPVTHKPRL DLLQLYSVLN SSLCNLSHQI NLSNLLGIES ILNPNLATSL LSTQSNSQDI 180 IPKNFQENQL DSSYVQNQFQ SVQPNQIQAC IDSSTQFMNE TQLLQANLEQ LSTSQTNFNC 240 QNSLQGLWQE TGKYPNMGES LMPNCAYHEI SNQAMMKCSF ENLSNLGFNS SMISTPSSST 300 TPLQSSSTTY VNGGTEDERD SNCSNILMFD IPSSLDVNGL L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 1e-102 | MYB family protein |