PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664576.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 505aa MW: 55022.2 Da PI: 5.1146

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1.1e-17	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed lvd+v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_021664576.1 33 KGPWTSAEDAVLVDYVTKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 80 79******************************************9986 PP
2	Myb_DNA-binding	50.4	5.2e-16	86	129	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ +++++++ +G++ W++ a++++ gRt++++k++w++ XP_021664576.1 86 KGAFTPEEERRIIELHANMGNK-WARMAAELP-GRTDNEIKNYWNT 129 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MSRMTNGGED DKRSKGRLDS PAIEEASNGP LKKGPWTSAE DAVLVDYVTK HGEGNWNAVQ 60 KHSGLSRCGK SCRLRWANHL RPDLKKGAFT PEEERRIIEL HANMGNKWAR MAAELPGRTD 120 NEIKNYWNTR IKRLQRAGLP IYPPEVCLKI LNGSQKSQNI GTLQTADTHG PDLTQMDHLE 180 IPEAEFKNLE LNQGLLSYSP TVLDIPASSM LKQGVDTSHS NSFMFPTINP NKRLRESQIM 240 FPSLDGSVSS GHSAFIQSTD YFSEKITESF GMSSQYDSHT NTYGQPPLGG LPGSHALLND 300 NSSSSEPSCG AMKLELPSLQ YLGTQQDSWG TPTSPLLSLE SIDTFIHSPP TEQTQSDFLS 360 PRSSGLLEAV LYESQTLKNS KKCSDTSVAC GVENYPLNPY KTEWEVHGDP NSPLGHSAAS 420 VFSACTPISG SSSDEPGFDV KPETANPVST LYILDKEAPN QIDFMRPDVL LGSGWFGLGG 480 GCINDQSVRT DSVGSAFGDA VNSEC

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MSRMTNGGED DKRSKGRLDS PAIEEASNGP LKKGPWTSAE DAVLVDYVTK HGEGNWNAVQ  60
KHSGLSRCGK SCRLRWANHL RPDLKKGAFT PEEERRIIEL HANMGNKWAR MAAELPGRTD  120
NEIKNYWNTR IKRLQRAGLP IYPPEVCLKI LNGSQKSQNI GTLQTADTHG PDLTQMDHLE  180
IPEAEFKNLE LNQGLLSYSP TVLDIPASSM LKQGVDTSHS NSFMFPTINP NKRLRESQIM  240
FPSLDGSVSS GHSAFIQSTD YFSEKITESF GMSSQYDSHT NTYGQPPLGG LPGSHALLND  300
NSSSSEPSCG AMKLELPSLQ YLGTQQDSWG TPTSPLLSLE SIDTFIHSPP TEQTQSDFLS  360
PRSSGLLEAV LYESQTLKNS KKCSDTSVAC GVENYPLNPY KTEWEVHGDP NSPLGHSAAS  420
VFSACTPISG SSSDEPGFDV KPETANPVST LYILDKEAPN QIDFMRPDVL LGSGWFGLGG  480
GCINDQSVRT DSVGSAFGDA VNSEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	4e-95	MYB family protein