PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021663848.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB_related | ||||||||
Protein Properties | Length: 237aa MW: 27133.4 Da PI: 7.4209 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.1 | 4.8e-14 | 119 | 163 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + +++G+g+W++I+r + +Rt+ q+ s+ qky XP_021663848.1 119 PWTEEEHRKFLIGLRRFGKGDWRSISRNVVVTRTPTQVASHAQKY 163 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MNHDSLSSPI LTHSSSSPMI PGWNRYEDKR FEEALILFPE NSPDRWQKIA DHIGKSVQEV 60 TEHYDVLVHD IAEIESGRVK LPDYSDDFID SSWDSYMPAS ISFGKKTKLG EAERKKGTPW 120 TEEEHRKFLI GLRRFGKGDW RSISRNVVVT RTPTQVASHA QKYFLRQNAV KKERKRSSIH 180 DITTVDSNLV PVPANKNWNP PLGAPANQPS VLQEMPQADH LPNQEHPMGY QNYGFPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 7e-88 | MYB family protein |