PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021663738.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 469aa MW: 49357.8 Da PI: 6.6545

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021663738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.6e-12	256	301	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_021663738.1 256 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 301 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MQPCSREMQG INSLLNPSSQ IPLQDLQNQQ HQQIHSSHFD PSSSSNDDFL DQMLSTLPSC 60 SWTDLKSPWD LNPTTNLNIP INNSSAKPRD LSDETPPSIP ENVGLHNFDE SAILASKLRQ 120 HQISGGPSPA AAATAKLILQ QQLMMATRGG GMPQNDVVDG SSFNSPTQGG DGSVQALYSN 180 GFGAGFMHGT GQPSNHSQQH FHHPQAQGGA LQAQNFGNPG ITTVMNQTQA SGSTGGAPAQ 240 PRQRVRARRG QATDPHSIAE RLRRERIAER MKALQELVPN ANKTDKASML DEIIDYVKFL 300 QLQVKVLSMS RLGGAAAVAP LVADMSSEGG GRGGVGGGDC IQATANGGSL PCTSTNATQT 360 PSSNDTLTVT EHQVAKLMEE DMGSAMQYLQ GKGLCLMPIS LATAISTATS HSRNPVLNTN 420 NSNHHHHLLQ SNGEGPSSPS MSVLTVQSAT MGNGGGDASV KDAASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MQPCSREMQG INSLLNPSSQ IPLQDLQNQQ HQQIHSSHFD PSSSSNDDFL DQMLSTLPSC  60
SWTDLKSPWD LNPTTNLNIP INNSSAKPRD LSDETPPSIP ENVGLHNFDE SAILASKLRQ  120
HQISGGPSPA AAATAKLILQ QQLMMATRGG GMPQNDVVDG SSFNSPTQGG DGSVQALYSN  180
GFGAGFMHGT GQPSNHSQQH FHHPQAQGGA LQAQNFGNPG ITTVMNQTQA SGSTGGAPAQ  240
PRQRVRARRG QATDPHSIAE RLRRERIAER MKALQELVPN ANKTDKASML DEIIDYVKFL  300
QLQVKVLSMS RLGGAAAVAP LVADMSSEGG GRGGVGGGDC IQATANGGSL PCTSTNATQT  360
PSSNDTLTVT EHQVAKLMEE DMGSAMQYLQ GKGLCLMPIS LATAISTATS HSRNPVLNTN  420
NSNHHHHLLQ SNGEGPSSPS MSVLTVQSAT MGNGGGDASV KDAASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	261	266	RLRRER
2	329	338	GGGRGGVGGG
3	330	339	GGGRGGVGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	3e-57	bHLH family protein