PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021663710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | SRS | ||||||||
Protein Properties | Length: 207aa MW: 22634.8 Da PI: 9.1186 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 186.9 | 7.8e-58 | 9 | 147 | 4 | 153 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskk 98 g+++CqdCGnqakkdC ++RCRtCCks+gf C+thvkstW+pa+krr+r q+la++s aa + +++++ e+ + + + + + XP_021663710.1 9 GGQRCQDCGNQAKKDCIYMRCRTCCKSKGFPCETHVKSTWIPAYKRRQRPQNLASSSVAAAVL--SMQQQHPPEH----NPKRLR-----RNLLT 92 7789*********************************************99998875554432..2222222222....222222.....23344 PP DUF702 99 eletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 le+ ++P++v+++a frc rvss+d++e+++aY+t+vsigGh+fkGiLydqG++ XP_021663710.1 93 GLEVGNFPAQVKTMATFRCFRVSSIDEAEDQFAYKTSVSIGGHIFKGILYDQGPD 147 678999***********************************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 207 aa Download sequence |
MMMREGGLGG QRCQDCGNQA KKDCIYMRCR TCCKSKGFPC ETHVKSTWIP AYKRRQRPQN 60 LASSSVAAAV LSMQQQHPPE HNPKRLRRNL LTGLEVGNFP AQVKTMATFR CFRVSSIDEA 120 EDQFAYKTSV SIGGHIFKGI LYDQGPDLES SSSYLQDPNL TIAGALTAAT ALASTSSSVA 180 ADSLATSYPF PLNAFMSGTQ LFLHPKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66350.1 | 1e-54 | SRS family protein |