PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021663493.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 441aa MW: 49479.7 Da PI: 8.4906

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021663493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5.1e-06	58	80	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_021663493.1 58 YVCEICNQGFQRDQNLQMHRRRH 80 9*********************9 PP
2	zf-C2H2	16.1	3.3e-05	135	157	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_021663493.1 135 WVCEKCSKGYAVQSDYKAHLKTC 157 58*******************98 PP
3	zf-C2H2	11	0.0014	165	183	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ t+ XP_021663493.1 165 DCGRVFSRVESFIEHQDTC 183 9***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MLASNPSSSL PFSSSDPFSC LETSTNNNKR KRRPAGTPDP DAEVVSLSPK TLLESDRYVC 60 EICNQGFQRD QNLQMHRRRH KVPWKLLKRE TPVVKKRVFV CPEPSCLHHD PCHALGDLVG 120 IKKHFRRKHS NHKQWVCEKC SKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ 180 DTCNMERLRP ESQSLQPACL SRTASSPSPS TDTNFSTAPW PPLVIPRKTS DAMFLSPTAD 240 KKDYNLELQL SSTSNLLEVS VSPKRDDNHS TQLQLSIGSS DFSEKNDSSN MTCTTKDAGK 300 LSPGESNNNS EKPDLPASKV KEAAWEQLRL AMAEKAYAEE ARQRAKRQIE LAEQEFANAK 360 RIRQQAQVEL DKAQALREHA MKQINSTILQ ITCHACKQQF QARTSPDDQN SLVLSYMSSA 420 ITEGEVENHN LAKTACNLPI N

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MLASNPSSSL PFSSSDPFSC LETSTNNNKR KRRPAGTPDP DAEVVSLSPK TLLESDRYVC  60
EICNQGFQRD QNLQMHRRRH KVPWKLLKRE TPVVKKRVFV CPEPSCLHHD PCHALGDLVG  120
IKKHFRRKHS NHKQWVCEKC SKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ  180
DTCNMERLRP ESQSLQPACL SRTASSPSPS TDTNFSTAPW PPLVIPRKTS DAMFLSPTAD  240
KKDYNLELQL SSTSNLLEVS VSPKRDDNHS TQLQLSIGSS DFSEKNDSSN MTCTTKDAGK  300
LSPGESNNNS EKPDLPASKV KEAAWEQLRL AMAEKAYAEE ARQRAKRQIE LAEQEFANAK  360
RIRQQAQVEL DKAQALREHA MKQINSTILQ ITCHACKQQF QARTSPDDQN SLVLSYMSSA  420
ITEGEVENHN LAKTACNLPI N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	34	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-162	C2H2 family protein